Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01302 ATGGATACTAAACTCACCAACAACAACCAACAAGATGCACCTCAGCAAAACATTGCCGACTCTCCTCCTTCTTCTTCTCTCTTCAACATCGATGGCGTTGTCGCCTCCCCCTCTTCCTCGTCCAAGAGAAGGAGGGCGATACAGAAAAGGGTGGTGCAAATCCCGATCAAGGAGACAGAAGGGTGTAGGCTAAAAGGAGAGAGCAACACCCCGCCGTCGGATTCATGGGCATGGAGAAAGTACGGGCAGAAACCGATCAAGGGTTCACCTTATCCAAGGGGGTACTACAGGTGTAGCAGCTCCAAGGGGTGCCCGGCACGGAAACAAGTGGAAAGGAGCTGCGTGGACCCCACAATGTTGGTCGTCACTTACTCCTCCGACCACAACCATCCCTGGCCAGCTTCAAGAAACAACACCAGGCCCACAAAGAAGCCCGAGCCCGAACCGGTAACGGAGGACCCGGTCGAGCCGGAGACGGAACCGGAACTGGAGGACAAGTTTGCGGAACTGGGCGGGGACGAATCCATGATCACCACCGCGGATGAGATGGGGTGGCTGGGGGAGATGGAAACGACGACGCCCACTGTTCTCGAAAGCCCAATTATTGCCGCAGGGTACCACGCTGACGTGGAGTCGGCGTTGCTGCCGATGAGGGAAGAGGACGAGCTGCTCTTCGCGGACCTCGGGGAGCTGCCGGAGTGCTCCGTCATGTTCCGGCAGGGGCTTCTGGCGGAGCGGCGGCGGTACACGGCGCCGTGGTGCGGGACCACAAGTTGA 777 0.5856 MDTKLTNNNQQDAPQQNIADSPPSSSLFNIDGVVASPSSSSKRRRAIQKRVVQIPIKETEGCRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSCVDPTMLVVTYSSDHNHPWPASRNNTRPTKKPEPEPVTEDPVEPETEPELEDKFAELGGDESMITTADEMGWLGEMETTTPTVLESPIIAAGYHADVESALLPMREEDELLFADLGELPECSVMFRQGLLAERRRYTAPWCGTTS 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01302 258 Pfam WRKY DNA -binding domain 74 131 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun3g01302 258 MobiDBLite consensus disorder prediction 126 140 - -
Viun3g01302 258 MobiDBLite consensus disorder prediction 1 42 - -
Viun3g01302 258 MobiDBLite consensus disorder prediction 126 162 - -
Viun3g01302 258 MobiDBLite consensus disorder prediction 1 48 - -
Viun3g01302 258 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 9 236 IPR044810 GO:0003700
Viun3g01302 258 SUPERFAMILY WRKY DNA-binding domain 70 133 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun3g01302 258 MobiDBLite consensus disorder prediction 62 83 - -
Viun3g01302 258 ProSiteProfiles WRKY domain profile. 73 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun3g01302 258 SMART WRKY_cls 72 132 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun3g01302 258 FunFam WRKY transcription factor 65 47 133 - -
Viun3g01302 258 Gene3D WRKY domain 61 134 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01302 Viun-Chr3 8148579 8150446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01302 9 240 WRKY Transcription Factor Family AT1G29280 52.521 1.44e-78 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun3g01302 WRKY 5.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01302 - - gmx:100127392 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g01302 3 8148579 8150446 Viun3g01302 3 8148579 8150446 ECH