Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01289 ATGAAGTGGGGTGGAAAAAAGCCTTCTCCTTCTCCTTCTTCCTCTTCTAGGCCTTCTTTCGCATCTCATGTGTCTCCTTTTTCATGGCTTTCCAAGTTCAAGCATATGAGAATGAACTCAGAGCCAAAACCTGGCGCACTCAAGCAAAATGCAAAGCAGAATTCAACTCCATCAGATACCTCACCCCATTATGCCTGTGGGAATAATAGAGGCAGGTTTTATGGAGGGGATGATGAGGCTTTCTGGAGACTCTCATTTGGTGAAGAGGGTAATGAGCACAGAAAAAGTGATGATATTCTGAAGCCACCCAAGTACAAATTGGATGCTGAACATGTCATTCCATCCTCAAGTTTCCCCGCTGGATTGAATAATGCTAAAAGACAAGGTAGAAGAGAAGTCACTCAGAAGTTGAAGCAGAAGGACACTGGACTGAGAGAAGAAACAACATTGCTGAATGAAGCTGCCAGGAGTGTAAAGGAACTCGAATCCTTGAGGAGGAGATATGAGAGGAAAGCACAAAGAGTTTTGCAAGAGCAGCTCTTGAAATTGGAAAAGGCAGAAGAGGAAGCTGGGTTTGCATCAAGTCCGTTCTTAGAAAATGATGTGCTGCAATATGAGTCACCCAGAACAATTTGCACGCCAAGGAAGCATTTGTTTGTAGATTCCAAAAGTTCTGGCCTTGGAAATCTCAGAGAAGCTAGAGTGAGTAGTCCCCAATTGGATTCTGAGTGGCATAATCTGAAACAAACTGAGGAGATGAAATTGAAAGCAAAGAGTAACCAACAAATGCAATCGCTTCATGTGAGCAGAGAAAACCAGAGGAGGAAATCAAAGCAGAACTCCAAGGTTAGAGTACATTCTCCAAGAATGGGTTCCAAAGTTGAAGTCCGCAAAATAAAGGCAATAGAAGAGAAGAAGAAAGCAAAACTGAAGATGAAGAAAGAAGAGGAAATCGTGGAGGAAACAGAAGGGTTAGATAGCTTTGCGGTGGTGAAATGTTCTTTGGATCCACAGAAGGATTTCAGAGATTCAATGATTGAGATGATCACAGAGAAACAGATCAGGCAGCCAGAAGAAATGCAAGATCTGCTAGCATGTTATCTGACTTTGAATTCTAATGAGTACCATGATCTCATCATCCAAGTCTTCAAGCAAGTATGGTTTTGCATGAGCCGAGCCAGTTCGGGTATTCAATCACACAAGCAATGCTGTTATTGTGATTAA 1224 0.4232 MKWGGKKPSPSPSSSSRPSFASHVSPFSWLSKFKHMRMNSEPKPGALKQNAKQNSTPSDTSPHYACGNNRGRFYGGDDEAFWRLSFGEEGNEHRKSDDILKPPKYKLDAEHVIPSSSFPAGLNNAKRQGRREVTQKLKQKDTGLREETTLLNEAARSVKELESLRRRYERKAQRVLQEQLLKLEKAEEEAGFASSPFLENDVLQYESPRTICTPRKHLFVDSKSSGLGNLREARVSSPQLDSEWHNLKQTEEMKLKAKSNQQMQSLHVSRENQRRKSKQNSKVRVHSPRMGSKVEVRKIKAIEEKKKAKLKMKKEEEIVEETEGLDSFAVVKCSLDPQKDFRDSMIEMITEKQIRQPEEMQDLLACYLTLNSNEYHDLIIQVFKQVWFCMSRASSGIQSHKQCCYCD 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01289 407 Coils Coil 144 189 - -
Viun3g01289 407 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 222 391 IPR038933 GO:0045892
Viun3g01289 407 MobiDBLite consensus disorder prediction 35 70 - -
Viun3g01289 407 Pfam Transcriptional repressor, ovate 334 390 IPR006458 -
Viun3g01289 407 MobiDBLite consensus disorder prediction 1 23 - -
Viun3g01289 407 NCBIfam uncharacterized plant-specific domain TIGR01568 329 389 IPR006458 -
Viun3g01289 407 MobiDBLite consensus disorder prediction 256 290 - -
Viun3g01289 407 MobiDBLite consensus disorder prediction 46 65 - -
Viun3g01289 407 Coils Coil 298 325 - -
Viun3g01289 407 ProSiteProfiles OVATE domain profile. 330 389 IPR006458 -
Viun3g01289 407 MobiDBLite consensus disorder prediction 8 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01289 Viun-Chr3 8057873 8059414 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Viun3g01289 Ovate 7.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01289 - - gmx:106798868 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g01289 3 8057873 8059414 Viun3g01289 3 8057873 8059414 ECH