Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01218 ATGTCTGGGCTTGAACCTTTTGTCTCTCCTCTTGTTGGAGCGGTGGGAACAATTGGGATTGGAGAAGTACGCAATACCCTTGCATCTAAATTTGCATTTTCAAAAAATCTGGATGACAATTACCACATTTTGGTCAAAGATACAGAGATGCTACAAGCAATAATGAAGGATAAAGAGATCGAAGCTCAAAGAAACCACCACAGAGATACTTCCAATGCTTACAAACTATGGACAAACAAGGTATCAAATGTCACAGAAGAAGTGCAGGAGCTGAAGCTTAAATATGAAATAAAGACTCTACCCCGGTGGCGGATTCAAAAACGCTCCCGTATGAGTGAAGAAATGGAGAAGAAGAGTAATTGGATTCGTCAACTTATCAATGATGGATGTCTAAAAAATTTTCTTGTTGATAAACCACCAGAACCTGTTTTAAAGGAGTTAAATGTTCCTCAGATAAGTGGATATCCAACCCTTCAAGGCACCTTGGATAATATTCTGGATTTGCTGAAAAATAATAAAATCAAAATCATTGGAGTGTGTGGGACAAAAGGGGTGGGAAAAACAACAATAATGCGGAATCTAAACAACAATGAAGAGATAGCTAAACTGTTTGAAATTGTCATTTTTGTAAAAGTCACATCTAATGATCATAAGCTTCAAGAGAAAATTGCTCATCGATTGATGTTGTACAAAGGGACCACTAACAATGAGGATAGTGATGATGTTGCAAGAAGAATATACAGAGAGCTGGACAACAAAAGATATTTATTAATTTTGGATGAGGTTGAGGATGCCATCAATTTGGAGCTGTTGGGAATCCCAAGTAATGGCAGCAAGGTGGTGATTGTCACTCGATTCCCTCGTGTTTATAAGTTGAATAGGGTGCAGAGGGTAATCAACGTCGAGAAGCTATCTCTTGATGAAGCATGGAAGATGTTTAGAGATACTGTTCATGCCTTCAATCCTAAGATTGATTCCCCTGACATTCAACTACCTGCAAAACTTGTATGTAAAAGATGCTGCTGTGGTCTTCCACTTCTCATTTACAATATAGCAAACTCTTTTCGATTGAAAGAGTCCGCTTCTAGTTGGTGGGCGGGACTTGAAGACCTTAAACCATGGCCAGAACTTCAAAGCCAAGGTTTAGAAGAGTTGTACTCGTGTCTGAAGTTCTGTTATGATGAACTCAATGATAAAAGGAAGCAGAAATGCTTTCTATACACTTCAATGTATCCTGCAGATAGCAAGGTTTACTCTGATTATTTAGTGGAGTGTTGGGCAGCACAAGGTTTACTCGGTGATATAAATGATGAAAGATCATATCAAAGTGCACGCAATCGTGGTATTGACATATTAGAACATCTTGCTAATGTATCTCTACTAGAGAAAGGGGAAGCAATGATATATGTTAACATGAACCATTGCATGAGACAACTTGCATTGCACATATCCTCTAAAGATCCTGAGTGTAGCTTTTATCTTCAAGACGGTGAAGAATCTGAAAATCTCTCAAATTCAAGAGCTTGGCAGCAGGCTAGGTGGGTCTCTATGGGACAAGTACATGATTTACGAACAAGCCAGGATTGCAGCACGATTTTGACATTGTTGCTGAGAAAAATTCCTGAGCTACCAGAAAGTTTTTTTGAGAACATGAGCAGTCTACTTCTGTTAGACTTGTATAGTAGCATGATTACACAACTGCCGTCATCTCTATCAAAATTGACTGGTCTTCGGGGTTTATTCTTGAACAGGTGTGAGCTATTGGAATCACTATCATCTGAAATAGGATTACTTCAATTTCTAGAGGTCCTTGACATACGAGATACTAAAGTAACTTTCATACCTCTACAAATTGGATTTTTGACTAAGCTAAGATGTCTGCGAATCCCATTCATTGCAAGTGAAGATAATCAAGTTCAAAATGTTCATGCTATTTCAAAGCTTCATAGGTTGGAAGAATTAACTATTCAAGTCATATCCTATGAACAGTGGTGCAACCATGCTGAAAATGTGTTGCAACATGTGGCTTCTTTGGAAAATGTAACCCATCTCAGATGTTGTTTTCCCTCCTCAACCATTCTTGGAGAATTTCTTTCAAGAAGCAAATCATGGCATAAGAAGCAGAGTTCGTTTAGATTCACTGTAGGATGCCAGAACTCAAGGCGACCTCAAATTCTCGAATCCTTTGAATATAAAATCACTAATTATTTGAGGTACTGCAATGGTGGACAGAAGGATGACCCGGCAATTATTGAGGTACTACCAAAAACTGATGCATTTGAATTAGTCTGCCATAAAGATATGAAAAAAATTTCCAATTTTGCTGGCATAGCTTGTTTGGAACGCATTCGTGGTCTTTTGATTAAAAGATGCAACCAAGTTTTGACAATTGTGTCAGGCGAAACAAGTAGCAATGCCATGAACGGAATCCAAATAGAAACAACAGTCATCTTACCAAATTTGGAGCAACTTTATTTGGAAAATTTGCTCAATTTAAAATGTGCTTTTAGAGGCCCCCTGCACAGTGGAACATTTTCCAGATTACAAGCTCTGTCATTGAAAAATTGTCCAAGACTGAGTCAAATTTTCAGTAATGGAGCAATTCAACATTTTTCAGAACTTCAGAAGCTGAAACTAGAAGATTGTTCAAAAATTGAAGAACTTATCGGAGAAGACATTGAAAGAGAAAGGGATGTGCTTCCAAAACTGGAAATACTTCTGCTAGTTAACTTGCCTAACTTAAAAAACATATGCGCAACTCATACATTGGCTTGGTCCTCTTTGGAGCTGTTAAGGATACATAACTGTCCTATGTTTAAAACTTTACCACTGGACAGTACCAATGCAGTCAACTTAAAGTCCATTAAAGGACAGCAAGAATGGTGGACTAACTTGGATTGGACAAACAATGACAAGGTGCATAAGCGATTTCAACCCATATTTGTTGCTTCCAATGAGTATTTTTCTTAA 2970 0.3795 MSGLEPFVSPLVGAVGTIGIGEVRNTLASKFAFSKNLDDNYHILVKDTEMLQAIMKDKEIEAQRNHHRDTSNAYKLWTNKVSNVTEEVQELKLKYEIKTLPRWRIQKRSRMSEEMEKKSNWIRQLINDGCLKNFLVDKPPEPVLKELNVPQISGYPTLQGTLDNILDLLKNNKIKIIGVCGTKGVGKTTIMRNLNNNEEIAKLFEIVIFVKVTSNDHKLQEKIAHRLMLYKGTTNNEDSDDVARRIYRELDNKRYLLILDEVEDAINLELLGIPSNGSKVVIVTRFPRVYKLNRVQRVINVEKLSLDEAWKMFRDTVHAFNPKIDSPDIQLPAKLVCKRCCCGLPLLIYNIANSFRLKESASSWWAGLEDLKPWPELQSQGLEELYSCLKFCYDELNDKRKQKCFLYTSMYPADSKVYSDYLVECWAAQGLLGDINDERSYQSARNRGIDILEHLANVSLLEKGEAMIYVNMNHCMRQLALHISSKDPECSFYLQDGEESENLSNSRAWQQARWVSMGQVHDLRTSQDCSTILTLLLRKIPELPESFFENMSSLLLLDLYSSMITQLPSSLSKLTGLRGLFLNRCELLESLSSEIGLLQFLEVLDIRDTKVTFIPLQIGFLTKLRCLRIPFIASEDNQVQNVHAISKLHRLEELTIQVISYEQWCNHAENVLQHVASLENVTHLRCCFPSSTILGEFLSRSKSWHKKQSSFRFTVGCQNSRRPQILESFEYKITNYLRYCNGGQKDDPAIIEVLPKTDAFELVCHKDMKKISNFAGIACLERIRGLLIKRCNQVLTIVSGETSSNAMNGIQIETTVILPNLEQLYLENLLNLKCAFRGPLHSGTFSRLQALSLKNCPRLSQIFSNGAIQHFSELQKLKLEDCSKIEELIGEDIERERDVLPKLEILLLVNLPNLKNICATHTLAWSSLELLRIHNCPMFKTLPLDSTNAVNLKSIKGQQEWWTNLDWTNNDKVHKRFQPIFVASNEYFS 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01218 989 Gene3D - 303 392 IPR042197 -
Viun3g01218 989 SUPERFAMILY L domain-like 526 956 - -
Viun3g01218 989 PRINTS Disease resistance protein signature 249 263 - -
Viun3g01218 989 PRINTS Disease resistance protein signature 869 885 - -
Viun3g01218 989 PRINTS Disease resistance protein signature 176 191 - -
Viun3g01218 989 PRINTS Disease resistance protein signature 341 355 - -
Viun3g01218 989 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 59 943 - -
Viun3g01218 989 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 407 IPR027417 -
Viun3g01218 989 Gene3D Ribonuclease Inhibitor 762 972 IPR032675 -
Viun3g01218 989 Gene3D Ribonuclease Inhibitor 496 715 IPR032675 -
Viun3g01218 989 Coils Coil 74 94 - -
Viun3g01218 989 Gene3D - 142 300 IPR027417 -
Viun3g01218 989 Gene3D - 393 482 IPR036388 -
Viun3g01218 989 Pfam NB-ARC domain 161 395 IPR002182 GO:0043531
Viun3g01218 989 SMART AAA_5 173 305 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01218 Viun-Chr3 7638176 7641931 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01218 174 562 WRKY Transcription Factor Family AT5G45050 22.141 2.35e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01218 - K13459 gmx:102668045 1557.73