Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01215 ATGTCTGGGCTTGAAGTTGTTGGCCCTCTTGTTGGAGAGATGGGATCGATTGGGGTTGGAGAAATGCATACTACAATTACATCTAAAATTGCATTTTCCAAAAATCTGGATGACAATTACAACATTTTGGTCAAAGATACAGAGATGTTACATGCAATAAAGAAGGATAAAGAGATGAAAGCTCAAAGAAACAGCCACAAAGACACTACCAATGCCTACAAACTGTGGACAAACAGGGTATCAGAGACCACAGAAGAAGTACAGAAACTAAAGCTTAAATATGAAGAAAAGACCCTGCCCTGGTGGCGGATTCAAAAGCGTTCTCATCTGAGTGAAGAAATGGAGAAGAAGAGCAATTGTATTCGTCAACTTATGAATGATGAATGTTTAAAAGATTTTCTTGTTGATAAACCACCAGAGCCTGTTTTAAAGGAGTTAAATGTTCCTCAGATAAGTGGATATCCAACCCTTCAAGGCGCCTTGAACAGTATTCTGGTTTTGCTGAAAAATAGTAAGATCAAGATCATTGGAGTGTGTGGAACAAAAGGGGTGGGGAAAACAACTATAATGCGGAATCTAAACAACAATGAAGAGGTAGCTAAATTGTTTGAAATTGTCATTTTTGTAAAAGTCACCTCTAATGATAGTAACCTTCAAGAAAAAATTGCTCATCGGTTGATGTTGGAGAAAGGGACCAACAAAGAAGATAGTGACTATGTTGCAAGAAGAATACACAGAGAGCTAGAGAACAAAAAATACTTATTAATTTTGGATGAGGTTGAGGATGCCATCAATTTGGAGCTGTTGGGAATCCCAAGTGATAATAACAATGGCAGTAAGGTGGTGATTGTCACTCGATTCCCTCTTGTTTATAAGTTGAATAGGGTGCAGAGGGTCATCAAAGTCGCGGAGCTATCTCCCGATGAAGCATGGAAGATGTTTAGAGACACTGTCCATGCCTTCAATCCTAAGATCGATTCCCCTGACATTCAACCAACTGCAAAACTTGTATGCAAAAGATGCTCTCGTCTTCCACTTCTCATTTACAATATAGCAAACTCTTTTAAATTGAAAGAGTCTGCTTCTAGTTGGTGGGCAGGACTTGAAGATCTCAAACCATGGCCAGAACTTCAAAGCCAAGGTTTAGAAGAGTTGTACTCGTGTCTGAAGTTTTGTTACGATGAACTCAATGATAAAAGGAAGCAGAAATGCTTTCTATACACTTCACTGTATCCTGCAGAAAGCAAGGTTTACTCTGATTATTTAGTGGAGTGTTGGGCAGCACAAGGTTTGCTTGGTGATATAAATGATAAAAGATCATATCAAAGTGCACGCAATTGTGGTGTTGATATATTAGAACATCTTGCTAATGTCTCTCTACTGGAGAAAGGAGAAGCAATGATATATGTTAACATGAACCATTGCATGAGACAACTTGCATTGCACATATCCTCTAAAGATCCTGAGTGTAGCTTTTATCTCCAAGACGGTGAAGAATCTGAAAATCTCTCAAATTCAAGAGCTTGGCAGCAGGCTAGGTGGGTCTCTATGAGACAAGTACATGATTTACGAAGAAGTCAAGATTGCAGCACGATTTTGACATTATTGTTGAGAAAAAATCCCGAGCTAACTGCACTACCAGAGAGTTTTTTTGAGAACATGAACAATCTACTTCTGCTAGACTTGTATAGTAGCATGATTACACAACTGCCATCATCTCTAGCAAAATTGACTTGTCTACGGGGTTTATTCTTGAACAGGTGTGAGCTATTGGAATCACTGTCGTCTGAAATAGGATTACTTCAATTTCTAGAGGTCCTTGACATACGAGATACTAAAGTAACTTTCATACCTCTACAAATTGGACTTTTGACCAAGCTAAGATGCCTGCGAATCCCATTCACTGCAAGTGAAGATAATGGAGTTCAAAATGTTCATGCTATTTCAAAGCTTCATAGGTTGGAAGAATTAACTATTCAAGTCATATCCTATGAAGAGTGGTGCAACCATGCTGAAAATGTGCTGCAACATGTGGCTTCTTTGGAAAATGTAACTCATCTCAGATGTTGTTTTCCCTCCTCAATCATTCTTGGAGAATTTCTTTCAAGAAGCAAATCATGGCATAAGAAGCAGAGTTCATTTATATTCACTGTAGGATGCCAGAACTCAAGGCGACCTCAAATACTTGAATCCTTTGAATATAAAATTACTAATTATGTGAGGTACTACAATGGTGGACAGAAGGATGACCCAGCAATTATTGAGGTACTACCAAAAACTGATGCATTTGAATTAGTCTGCCATAAAGATATAAAAAAATTGTCCAATTTTGCTGGCATAGCTTGTTTGGAACGCATTCGCGGGCTTTTGATTAAAAGATGCAACCAAGTTTTGACAATTGTGTCAGGCGAAACAAGTAACAATGCCATGAATGGAATCCAAGTGGAAACAACAGTCATCTTACCAAATTTGGAGCAACTTTATTTGGAAAATTTGCTCAATTTAAAATGTGCTTTTAGAGGCCCCCTGCACAGTGGAACATTTTCCAGATTACAAACTCTGTCTTTGAAAAATTGTCCAAGACTGAGTCAAATTTTCAGCAATGGAGCAATTCAACATTTTTCAGAACTTCAGAAGCTGAAACTTGAAGATTGTTCAAAAATTGAAGAACTTATCGGAGAAGACATTGAAAGAGAAAGGGATGTTCTTCCAAAACTGGAAATACTTCTGCTAGTTAACTTGCCTAACTTAAAAAGTATATGCGCAACTCATACATTGGCTTGGTCCTCTTTGGAGCTGTTAAGGATACATAATTGTCCTAAGTTTAAAACTTTACCACTGGACAGTGCCAATGCAGTCAACTTAAAGTCCATCAAAGGACCGCAAGAATGGTGGGCTAACTTGGATTGGACAAACAATGAAGAGGTTCATCAGCGATTGCAACCCATGTTTGTTGCTTCCAATGAGTACTTTTCTTAA 2979 0.382 MSGLEVVGPLVGEMGSIGVGEMHTTITSKIAFSKNLDDNYNILVKDTEMLHAIKKDKEMKAQRNSHKDTTNAYKLWTNRVSETTEEVQKLKLKYEEKTLPWWRIQKRSHLSEEMEKKSNCIRQLMNDECLKDFLVDKPPEPVLKELNVPQISGYPTLQGALNSILVLLKNSKIKIIGVCGTKGVGKTTIMRNLNNNEEVAKLFEIVIFVKVTSNDSNLQEKIAHRLMLEKGTNKEDSDYVARRIHRELENKKYLLILDEVEDAINLELLGIPSDNNNGSKVVIVTRFPLVYKLNRVQRVIKVAELSPDEAWKMFRDTVHAFNPKIDSPDIQPTAKLVCKRCSRLPLLIYNIANSFKLKESASSWWAGLEDLKPWPELQSQGLEELYSCLKFCYDELNDKRKQKCFLYTSLYPAESKVYSDYLVECWAAQGLLGDINDKRSYQSARNCGVDILEHLANVSLLEKGEAMIYVNMNHCMRQLALHISSKDPECSFYLQDGEESENLSNSRAWQQARWVSMRQVHDLRRSQDCSTILTLLLRKNPELTALPESFFENMNNLLLLDLYSSMITQLPSSLAKLTCLRGLFLNRCELLESLSSEIGLLQFLEVLDIRDTKVTFIPLQIGLLTKLRCLRIPFTASEDNGVQNVHAISKLHRLEELTIQVISYEEWCNHAENVLQHVASLENVTHLRCCFPSSIILGEFLSRSKSWHKKQSSFIFTVGCQNSRRPQILESFEYKITNYVRYYNGGQKDDPAIIEVLPKTDAFELVCHKDIKKLSNFAGIACLERIRGLLIKRCNQVLTIVSGETSNNAMNGIQVETTVILPNLEQLYLENLLNLKCAFRGPLHSGTFSRLQTLSLKNCPRLSQIFSNGAIQHFSELQKLKLEDCSKIEELIGEDIERERDVLPKLEILLLVNLPNLKSICATHTLAWSSLELLRIHNCPKFKTLPLDSANAVNLKSIKGPQEWWANLDWTNNEEVHQRLQPMFVASNEYFS 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01215 992 Coils Coil 73 93 - -
Viun3g01215 992 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 407 IPR027417 -
Viun3g01215 992 SUPERFAMILY L domain-like 512 958 - -
Viun3g01215 992 Gene3D Ribonuclease Inhibitor 764 973 IPR032675 -
Viun3g01215 992 Gene3D Ribonuclease Inhibitor 492 709 IPR032675 -
Viun3g01215 992 Gene3D - 304 397 IPR042197 -
Viun3g01215 992 Pfam Leucine rich repeat 534 590 IPR001611 GO:0005515
Viun3g01215 992 Pfam NB-ARC domain 167 395 IPR002182 GO:0043531
Viun3g01215 992 PRINTS Disease resistance protein signature 175 190 - -
Viun3g01215 992 PRINTS Disease resistance protein signature 341 355 - -
Viun3g01215 992 PRINTS Disease resistance protein signature 846 862 - -
Viun3g01215 992 PRINTS Disease resistance protein signature 247 261 - -
Viun3g01215 992 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 58 946 - -
Viun3g01215 992 Gene3D - 143 300 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01215 Viun-Chr3 7602454 7606265 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01215 173 565 WRKY Transcription Factor Family AT5G45050 21.168 1.11e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01215 - K13459 gmx:102661619 1639.01