Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01194 ATGATCAGGATAAATGTTGAAGTTATTTTTATGACAGAACAACTTGAAATTATTCAAGGGAAAGAGGTGGGGGAATTGTTGCAGTGGGAAGATGTTCAGAAAATGAAATACTCTTGGAATGTTGTGTGTGAAGTTATGAGGCTGTCTCCACCAGTCAGTGGTGCTTATAGAGAAGCTATAAAGGATTTCACCTATGCTGATTATAACATCCCTAAAGGCTGGAAGTTGCATTGGAACACTGGTTCATCACACAAGGATCCAACAATCTTCTCGAATCCAGAAACTTTTGATGCTTCAAGGTTTGAAGGAGCAGGACCTACACCCTTTGCACATGTTCCGTTTGGAGGTGGCCCCAGAATGTGTTTGGGCCAAGAATTTGCTAGACTAGAGATACTTGTGTTCATGCATAATATCGTGAAACGGTTCAAGTGGGAATTGGTGATTCCTGATGAAAAGTTGAAGTATGATCCCATGCTAGAACCAGTAAAAGGACTTGAAATTCGACTTCATCCTTCTAGTTTCTAG 525 0.4057 MIRINVEVIFMTEQLEIIQGKEVGELLQWEDVQKMKYSWNVVCEVMRLSPPVSGAYREAIKDFTYADYNIPKGWKLHWNTGSSHKDPTIFSNPETFDASRFEGAGPTPFAHVPFGGGPRMCLGQEFARLEILVFMHNIVKRFKWELVIPDEKLKYDPMLEPVKGLEIRLHPSSF 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01194 174 Gene3D Cytochrome P450 11 172 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01194 174 SUPERFAMILY Cytochrome P450 13 171 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01194 174 Pfam Cytochrome P450 13 151 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01194 174 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 114 123 IPR017972 GO:0005506|GO:0016705
Viun3g01194 174 PRINTS P450 superfamily signature 40 51 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01194 174 PRINTS P450 superfamily signature 121 132 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01194 174 PRINTS P450 superfamily signature 112 121 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01194 174 PANTHER CYTOCHROME P450 26 14 157 - -
Viun3g01194 174 PRINTS B-class P450 signature 112 121 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01194 174 PRINTS B-class P450 signature 40 51 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01194 174 PRINTS B-class P450 signature 57 84 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01194 174 PRINTS B-class P450 signature 85 100 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01194 174 PRINTS B-class P450 signature 121 132 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01194 Viun-Chr3 7438199 7439881 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01194 27 165 Cytochrome P450 AT3G19270 40.288 1.79e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01194 - K20667 vum:124831254 335.88