Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01193 ATGGAGGTTTCAAATCTTGTAGTTTTGCCAGCAGTTTTGGCATTCTTTGTCCTTTGTCTGCATTTCATGAGAAGAATGGTGAGACTCAGAAACCTTAATCTTCCTCCTGGAAGATTAGGGTGGCCTGTAGTTGGAGAAACCTTTGAGTTCATGCATGCAATGGTTGAGGGCAACGTGTTGAGGTTCCTACAAGAGAGAGTGGAGAAATATGACTCAAGGGTGTTCAAGACATCGATGTTTGGAAACCCTGTTGTTGTGTTTTGCGGACCAGCTGGGAACAAGTTTCTGTTTAGCAATGAGAACAAGAATGTTCAAGTGTGGTGGCCTAGTTCGGTGAGGAAGCTGTTAAGGTTGTCCCTTGTTACCAAGGTTGGTGATGAGGCAAAGATGGTGAGAAAGTTGCTCATGAACTTTCTTAACGCAGAAACACTCAGAAATTACTTGCCAAAAATGGATAGAATTGCTCAGCACCATATAGACACTTATTGGAAAGGAAAGGAGAAGGTTTTTGTCCATCCAATTGTAAAGCTATACACGTTTGAATTGGCTTGTTGCTTATTTTTAAGCATTGAAGACTCTGCACAAATATCAAAGCTTTCGTTAAAGTTTGATGCATTTCTGAAAGGGATCGTTGGCTTCTCCCTCAACATTCCTGGAACAAGGTTTCATCGTGCAATAAAAGCTGCAGATGAAATAAGGAAAGAAATTAAACTGATTCTGGAGAAAAGGAAAGTGGATTTGGAGGAGAAGAGAGCATCACCTACTCAAGACCTTCTATCACACATGCTTCTTACATCTGACCCAAGTGGAAGGTTTATGACAGAAATGGAGATTCTTGATAACATACTTCTTCTACTTTTTGCTGGCCATGATACTGCTAGATCAGTTTTATCATTGGTCATGAAATATCTTGGACAGTTACCTCAAGTTTATGAGCATGTCTTGAAAGAACAACTTGAAATTATTCAAGGGAAAGAGGTGGGGGAATTGTTGCAGTGGGAAGATGTTCAGAAAATGAAATACTCTTGGAATGTTGTGTGTGAAGTTATGAGGCTGTCTCCACCAGTCAGTGGTGCTTATAGAGAAGCTATAAAGGATTTCACCTATGCTGATTATAACATCCCTAAAGGCTGGAAGTTGCATTGGAACACTGGTTCATCACACAAGGATCCAACAATCTTCTCGAATCCAGAAACTTTTGATGCTTCAAGGTTTGAAGGAGCAGGACCTACACCCTTTGCACATGTTCCGTTTGGAGGTGGCCCCAGAATGTGTTTGGGCCAAGAATTTGCTAGACTAGAGATACTTGTGTTCATGCATAATATCGTGAAACGGTTCAAGTGGGAATTGGTGATTCCTGATGAAAAGTTGAAGTATGATCCCATGCTAGAACCAGTAAAAGGACTTGAAATTCGACTTCATCCTTCTAGTTTCTAG 1437 0.4078 MEVSNLVVLPAVLAFFVLCLHFMRRMVRLRNLNLPPGRLGWPVVGETFEFMHAMVEGNVLRFLQERVEKYDSRVFKTSMFGNPVVVFCGPAGNKFLFSNENKNVQVWWPSSVRKLLRLSLVTKVGDEAKMVRKLLMNFLNAETLRNYLPKMDRIAQHHIDTYWKGKEKVFVHPIVKLYTFELACCLFLSIEDSAQISKLSLKFDAFLKGIVGFSLNIPGTRFHRAIKAADEIRKEIKLILEKRKVDLEEKRASPTQDLLSHMLLTSDPSGRFMTEMEILDNILLLLFAGHDTARSVLSLVMKYLGQLPQVYEHVLKEQLEIIQGKEVGELLQWEDVQKMKYSWNVVCEVMRLSPPVSGAYREAIKDFTYADYNIPKGWKLHWNTGSSHKDPTIFSNPETFDASRFEGAGPTPFAHVPFGGGPRMCLGQEFARLEILVFMHNIVKRFKWELVIPDEKLKYDPMLEPVKGLEIRLHPSSF 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01193 478 FunFam Taxadiene 5-alpha hydroxylase 26 476 - -
Viun3g01193 478 PANTHER CYTOCHROME P450 26 31 461 - -
Viun3g01193 478 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Viun3g01193 478 Pfam Cytochrome P450 35 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01193 478 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01193 478 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01193 478 PRINTS E-class P450 group I signature 297 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01193 478 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01193 478 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01193 478 SUPERFAMILY Cytochrome P450 27 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01193 478 Gene3D Cytochrome P450 24 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01193 478 CDD CYP90-like 66 475 - -
Viun3g01193 478 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01193 478 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01193 478 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01193 478 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01193 Viun-Chr3 7436233 7439881 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01193 33 380 Cytochrome P450 AT5G36110 45.584 2.92e-105 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01193 - - gmx:100778139 844.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g01193 3 7436233 7439881 Viun3g01193 3 7436233 7439881 ECH