Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01165 ATGGCAAATTCAAAGGGCTCATCGGGTTTCAGAAATTTTATGTATCCTGGAAAGCATGCTCTACTTCCTCCTAAAAGTCCGTTTCCCAGTGTTTCCCAAGCGTACGCTGATTATGTCCAAAATCCCGCTGTTGGTTTAAAGGCTGGTAACAGGTCTAGAGAGGGAAATCCACACCACCAACGTACATCATCTGAGAGCCTTATTATAGAGGAGCAGCCTTCTTGGCTTGATGATCTCCTTAATGAGCCAGAGACACCTGTCCGAAGAGGTGGACATCGGCGTTCATCAAGTGATTCTTTTGCGTACCTAGACATGGCTAATGCATCTAACATCAATTATGCTGATCAGGACGAGTATAAATATAAGAGTTTGATGTCTATGCCATCTTGGTCATCTCAAGATTTTGACCGCAGCAAAGATGCTCGCCATCTACCTGCTTATGTGGATATGAACTTACCTAAACAGAAAAATAGGTCATGGGACTCTTTTTCAAATGCCATGACAAATCCTGTTGGTGTTCCCTCTGGCAAAGACAGTTCAGCTTTTCAGAGTTCAGGACTGCCAAGCACACCACAGGAAGCAGACGGGCTTCCACCTACTGCAACTGAAAAGCAAGATTCAGTAGAATCTGGATTACAGGATGCAAAATCGTTTTCTGAAAAAAAGGACAATTCACATGCAAAGCCATCTTCCTCTGAAACTGATACAAAACGTGCTAAACAGCAATTTGCTCAGCGTTCACGGGTTAGGAAACTTCAATACATAGCTGAGCTGGAAAGAAATGTACAAGCTTTACAGGCAGAAGGATCTGAAGTCTCAGCTGAGCTTGAGTTTCTTAATCAACAGAATCTTATCCTGAGTATGGAGAATAAAGCACTCAAGCAACGTTTAGAAAATATAGCACAAGAGCAGCTTATCAAATATTTGGAGCAGGAAGTACTGGAAAGAGAGATTGGAAGATTACGTGCATTGTATCAGCAGCAGCAGCAGCCACAGACGCAGGCACAACAGCAACCATCTGGTAGCCACAGACGCTCAAACAGCAGAGACCTTGAATCTCAGTTTGCAAACCTTTCTCTTAAACACAAGGATACCAATTCAGGGCAAGACCCTGCACTCAGAATTTAG 1128 0.4335 MANSKGSSGFRNFMYPGKHALLPPKSPFPSVSQAYADYVQNPAVGLKAGNRSREGNPHHQRTSSESLIIEEQPSWLDDLLNEPETPVRRGGHRRSSSDSFAYLDMANASNINYADQDEYKYKSLMSMPSWSSQDFDRSKDARHLPAYVDMNLPKQKNRSWDSFSNAMTNPVGVPSGKDSSAFQSSGLPSTPQEADGLPPTATEKQDSVESGLQDAKSFSEKKDNSHAKPSSSETDTKRAKQQFAQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQNLILSMENKALKQRLENIAQEQLIKYLEQEVLEREIGRLRALYQQQQQPQTQAQQQPSGSHRRSNSRDLESQFANLSLKHKDTNSGQDPALRI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01165 375 SMART brlzneu 233 292 IPR004827 GO:0003700|GO:0006355
Viun3g01165 375 MobiDBLite consensus disorder prediction 326 344 - -
Viun3g01165 375 MobiDBLite consensus disorder prediction 215 242 - -
Viun3g01165 375 MobiDBLite consensus disorder prediction 46 68 - -
Viun3g01165 375 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 10 360 IPR044797 -
Viun3g01165 375 Coils Coil 248 303 - -
Viun3g01165 375 SUPERFAMILY Leucine zipper domain 244 286 IPR046347 GO:0003700|GO:0006355
Viun3g01165 375 MobiDBLite consensus disorder prediction 146 245 - -
Viun3g01165 375 CDD bZIP_plant_RF2 235 283 IPR044759 GO:0003700|GO:0006355
Viun3g01165 375 MobiDBLite consensus disorder prediction 326 375 - -
Viun3g01165 375 MobiDBLite consensus disorder prediction 351 366 - -
Viun3g01165 375 MobiDBLite consensus disorder prediction 155 191 - -
Viun3g01165 375 Gene3D - 237 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01165 Viun-Chr3 7220469 7225472 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01165 71 307 bZIP Transcription Factor Family AT2G42380 32.806 2.79e-22 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01165 - - gmx:100813098 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g01165 3 7220469 7225472 Viun3g01165 3 7220469 7225472 ECH