Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01163 ATGGGTAAGTCTTCTTTCTCCTTCCGCCGCTCCGTCTCTCGCCGCCGCACCAAGAAGACCACAGCGCCACCCCCTCGCCGGTCCCCGCCACAGCCTCCCTACGCCGCTGGGATCACCACTTCGCCGGATGGAGCCGCAAACAACCGCCTCGTCGCAGGCGCAGGTGCCGGCACGTTGACCAAGGTGAAGAAGAAGACCGGCAGCGCTCGGCTCTGGATGAGGTTCGACCGGTCTGGCGGGTCCGAGCTCGTGGAGTGGGAGAAGAACACCATCATCCACCACGCCGCGATTCCCGCTCGAGACCTGAGAATCCTTGGCCCCGTCTTCTCCCACTCCTCGAACATCCTCGCTAGAGAGAAAGCAATGGTGGTTAATTTGGAGTTTATAAAGGCTATAGTGACGGCCGAAGAAGTGTTACTGCTTGATCCTCTTCGGCAGGAGGTTCTTCCCTTTGTTGAGCAACTCCGGCAGCAGCTTCCGGGCAAGAGTCCACCGAAACTTCTCGGCGCCGTGGAGGAGCAGGAAGGTGAATTGCAGGGTTCTAATGGCAGGCAATGGTTGCCTACGCCGGAGACGGCTGAAGGTTTGCAATCTGAACTTCCGTTCGAGTTTCAAGTTCTGGAGATTGCTTTGGAGGCTGTATGTACTTATCTGGACTCCAGTGTAGCCGACCTTGAGAGAGGTGCTTATCCTGTGTTGGACGAATTGGCTAGGAATGTTAGTACCAAAAATCTTGAACATGTGAGGAGTTTGAAGAGTAATCTCACACGGTTGCTGGCACGAGTGCAGAAGGTACGGGATGAAATTGAACATTTGTTAGATGACAACGAAGATATGGCACAACTATATTTGACAAGGAAGTGGCTGCTGAATCAACAGTTTGAGGAGGCTCAATTGGGTGCCACAACCTCAAATAACCTTCCTAATTCCGCCCGTTCTGTTCGACGCCTTGGTTCTACCAGAAGTGAAAGTCTTGCGGCCAGCCATTATGGGGATGATAATGATGTGGAGGACTTGGAGATGTTGCTTGATGCATATTTCATGCAGTTAGATGGAACTCGTAACAAGATATTATCTGTAAGGGAGTACATTGACGACACTGAAGACTATGTCAACATCCAACTCGATAACCATCGAAATGAACTTATTCAGCTGCAGTTGACATTGACTATTGCATCATTTGCTATTGCTATTGATACTTTGGTTGCGGGTACATTTGGTATGAACATTCCTTGTAAATTGTATAATATAGATGGAATATTTTGGCCCTTTGTTTGGATCTCGTCTGCAGCTTCTGTATTCCTTTTCTTGCTTATTTTAGCATATGCAAGATGGAAAAAGTTGCTGGGATCATAA 1356 0.4948 MGKSSFSFRRSVSRRRTKKTTAPPPRRSPPQPPYAAGITTSPDGAANNRLVAGAGAGTLTKVKKKTGSARLWMRFDRSGGSELVEWEKNTIIHHAAIPARDLRILGPVFSHSSNILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVLPFVEQLRQQLPGKSPPKLLGAVEEQEGELQGSNGRQWLPTPETAEGLQSELPFEFQVLEIALEAVCTYLDSSVADLERGAYPVLDELARNVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKWLLNQQFEEAQLGATTSNNLPNSARSVRRLGSTRSESLAASHYGDDNDVEDLEMLLDAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQLTLTIASFAIAIDTLVAGTFGMNIPCKLYNIDGIFWPFVWISSAASVFLFLLILAYARWKKLLGS 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01163 451 CDD Mrs2_Mfm1p-like 72 448 IPR039204 -
Viun3g01163 451 Pfam CorA-like Mg2+ transporter protein 330 444 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Viun3g01163 451 Gene3D Magnesium transport protein CorA, transmembrane region 146 382 - -
Viun3g01163 451 Gene3D - 58 143 - -
Viun3g01163 451 FunFam Magnesium transporter MRS2-1 60 143 - -
Viun3g01163 451 MobiDBLite consensus disorder prediction 1 45 - -
Viun3g01163 451 Coils Coil 248 282 - -
Viun3g01163 451 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 35 449 IPR039204 -
Viun3g01163 451 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 387 438 IPR045863 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01163 Viun-Chr3 7195843 7210597 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01163 1 451 MRS2 Gene Family AT3G58970 64.758 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01163 K16075 - gmx:100812561 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g01163 3 7195843 7210597 Viun1g03401 1 41203136 41206045 PCT