Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01155 ATGGATTCTCCTGGCACTTCCCACGGCTGTCCTCCCAGGGAGCATGAAGGCCATCATGATGCGGTTTTCTTACATGGTGACTTAGATCTATTGATAATTGAAGCCAAGTCTCTTCCAAATTTAGATTTGTCTTCAGAAGCAGTTAGAAAATGTATGACTTTGGGCAACATGTGCCATCCTCCATTTATGAAAGGAAAGTCACTCGGTGGAAAAGATAAGATGATAACAAGTGACCCTTATGTTTCAGTATGCATAGCTGGGGCAACCGTTGCTCGAACTAGAGTGATTCCTAACTGTGAGAACCCTTCCTGGGATGAGCAATTTATCGTGCCTGTTGCTCACCCTGCTCATAAAGTGGAGTTTCTCGTGAAGGATAATGATATTCTGGGGGCTGAACTCATTGGAGTGGTGGAGATACCTGTTTACAAGATAATTTCAGGAAATCCTGTCAACGATTGGTTTCCCATCATTGGTCAGTATGGAAACTGCTTAAAACCTTATCCTGAACTGCATCTTTCTGTTCAATATAAGCCAATAGAAGTGGACCGTAACCAAAAATTAATGAATGAGGATGGGACAGCATATTTAGGAGTTTCTAAAACCTATTTCCCTCTCAGGAAAGGAGGGAGTGTGACTCTGTATCAGGATGCACATATACCAGATGGTATGCTACCTGAAATTCCACTTGAGGGTGGAAAAATGTTTCAGCAAAATAAATGTTGGGAAGACATATGTCATGCAATTTTGGAAGCTCATCACATGATATACATTATAGGATGGTCGGTTTACCACCCAGTTAGGCTTATCAGAGAGGCAAAAAAGCCAGTACCTTCAGGGGGAGAGCTTTCACTTGGAGAGCTGTTGAAGTACAAGTCACAAGAAGGACTCCGAGTGGTTGTGCTGATTTGGGACGACAGAACTTCACATGACAAGTTTCTTTTGAAAACTGATGGTGTCATGCAGACTCATGATGAGGAAACTAAGAAGTTTTTCAAACATTCCACTGTTCATTGTGTGCTATCTCCACGTTATGCAAGCAATAAGCTCAGTATTTTCAAGCAACAGGCATGGAGTTGTTGCATTGAATCTAGTAGTGTTGTGGGAACCCTCTTTACACATCACCAGAAATGTGTGCTTGTAGACAGTCTTGGTTCTGGGAATAATCGGAAAATAACTGCTTTTATTGGTGGTTTGGATCTATGTGATGGTAGATATGATACCCCTGAGCATCGGCTTTTTCGTGATATCGATACAGTTTTTCATAATGATTTTCACAATCCTTCTTTTCAACAACTAAGTTCGAATTCGTGTGCTCCAAGGCAACCATGGCATGACTTACATTGTAAAATTGAAGGTCCAGCAGCATATGATATATTAACCAATTTTGAACAAAGATGGAGGAAGGCCAAAAAATGGCGTGATTTCAGGCTCAAAAAGGTGACAAACTGGCATGATGATGCTTTGCTTCGGCTGGATCGAATTTCATGGATTGTCAAACCTGCTCCTTGCCCCAATGGTGAAAAAGCTGTTTATGTAACCGATGAAAGTGATCCTGAAAGTTGGAATGTGCAGGTGTTTAGGTCCATAGATTCTGGATCTGTAAAGGGCTTTCCAAAGGATGTTGACAAAGCTAAGGCTCAGAATCTTTTGTGTGGAAAAAATTTGAAAGTTGATCAGAGCATCCATACTGCTTATGTAAGAGCAATAAGATCTGCCGAGCACTTTATATATATTGAGAATCAGTATTTTCTGGGCTCCTCCTATCACTGGCCTTCATATAAAAATAAAGCTGGTGCAAACCACTTGGTTCCCATGGAGTTGGCTTTGAAAATTGCTGGTAAGATCAGTGTAAATGAACGTTTTTCTGTATATATAGTTATACCAATGTGGCCAGAGGGTGTTCCAACAAGTGCTGCTGTTCAAGAAATCTTGTTCTGGCAGGGACAGACAATGTCTATGATGTACAAGATTGTTGCTGATGCCCTTGAAAAAGCAGGTCTCTCTGATCAGTATCATCCACAAGATTATCTCAATTTTTACTGCCTCGGAAAGAGAGAACCCTCAAGCGCAAATGTTTCTTCAACACCAAATCCATCAGAAAACCGCGCTTTGGTAGCAGTAAAAAAATTCAGACGTTTTATGATTTATGTTCATGCCAAAGGAATGATAGTTGATGACGATTACGTAATTATTGGATCAGCAAATATTAACCAGAGATCATTAGATGGTTCAAGGGACACAGAAATAGCTATGGGAGCTTATCAACCAAAATATACATGGACAGAAAGTAAACCCCATCCACGTGGCCAGGTGTATGGATACAGAATGTCACTGTGGGCTGAGCACCTTGGTAGTCTTGACCATTGTTTTAGTGAACCTCAGAGCCTGGAATGTGTTAGACAAGTGAACACAATTGCAAAACAAAACTGGGGCATATATGTGTCCGAAGATGGGAAATACATGAGGGGACATTTGATGCAATATCCCGTTAAGATCAGCAGGGATGGAAAAGTGAGTGCACTAGATGATCATGAATCTTTTCCTGATGTTGGTGGCAAAGTTCTTGGGTCAGCAAACTCACTTCCAGATCAACTAACCACCTGA 2604 0.4109 MDSPGTSHGCPPREHEGHHDAVFLHGDLDLLIIEAKSLPNLDLSSEAVRKCMTLGNMCHPPFMKGKSLGGKDKMITSDPYVSVCIAGATVARTRVIPNCENPSWDEQFIVPVAHPAHKVEFLVKDNDILGAELIGVVEIPVYKIISGNPVNDWFPIIGQYGNCLKPYPELHLSVQYKPIEVDRNQKLMNEDGTAYLGVSKTYFPLRKGGSVTLYQDAHIPDGMLPEIPLEGGKMFQQNKCWEDICHAILEAHHMIYIIGWSVYHPVRLIREAKKPVPSGGELSLGELLKYKSQEGLRVVVLIWDDRTSHDKFLLKTDGVMQTHDEETKKFFKHSTVHCVLSPRYASNKLSIFKQQAWSCCIESSSVVGTLFTHHQKCVLVDSLGSGNNRKITAFIGGLDLCDGRYDTPEHRLFRDIDTVFHNDFHNPSFQQLSSNSCAPRQPWHDLHCKIEGPAAYDILTNFEQRWRKAKKWRDFRLKKVTNWHDDALLRLDRISWIVKPAPCPNGEKAVYVTDESDPESWNVQVFRSIDSGSVKGFPKDVDKAKAQNLLCGKNLKVDQSIHTAYVRAIRSAEHFIYIENQYFLGSSYHWPSYKNKAGANHLVPMELALKIAGKISVNERFSVYIVIPMWPEGVPTSAAVQEILFWQGQTMSMMYKIVADALEKAGLSDQYHPQDYLNFYCLGKREPSSANVSSTPNPSENRALVAVKKFRRFMIYVHAKGMIVDDDYVIIGSANINQRSLDGSRDTEIAMGAYQPKYTWTESKPHPRGQVYGYRMSLWAEHLGSLDHCFSEPQSLECVRQVNTIAKQNWGIYVSEDGKYMRGHLMQYPVKISRDGKVSALDDHESFPDVGGKVLGSANSLPDQLTT 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01155 867 PIRSF PLD_plant 13 867 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Viun3g01155 867 PANTHER PHOSPHOLIPASE D 19 857 IPR015679 -
Viun3g01155 867 CDD C2_plant_PLD 21 176 - -
Viun3g01155 867 SMART pld_4 369 404 IPR001736 GO:0003824
Viun3g01155 867 SMART pld_4 713 740 IPR001736 GO:0003824
Viun3g01155 867 Gene3D Endonuclease Chain A 527 768 - -
Viun3g01155 867 Gene3D Endonuclease Chain A 230 488 - -
Viun3g01155 867 SUPERFAMILY Phospholipase D/nuclease 200 474 - -
Viun3g01155 867 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 369 404 IPR001736 GO:0003824
Viun3g01155 867 FunFam Phospholipase D delta 231 487 - -
Viun3g01155 867 Pfam C2 domain 26 156 IPR000008 -
Viun3g01155 867 SMART C2_3c 27 153 IPR000008 -
Viun3g01155 867 SUPERFAMILY Phospholipase D/nuclease 559 798 - -
Viun3g01155 867 Pfam Phospholipase D Active site motif 370 404 IPR001736 GO:0003824
Viun3g01155 867 Pfam Phospholipase D Active site motif 714 740 IPR001736 GO:0003824
Viun3g01155 867 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 24 178 IPR035892 -
Viun3g01155 867 Gene3D C2 domain 25 190 IPR035892 -
Viun3g01155 867 ProSiteProfiles C2 domain profile. 7 154 IPR000008 -
Viun3g01155 867 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 713 740 IPR001736 GO:0003824
Viun3g01155 867 Pfam Phospholipase D C terminal 787 857 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01155 Viun-Chr3 7177000 7185200 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01155 16 866 Phospholipase D Gene Family (Wang group) AT2G42010 53.075 0.0 921
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01155 K01115 - gmx:100810824 1572.37