Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01148 ATGGAGAAATACGAGTTGGTAGAAGAGAATATAGGCGATGGGAGAGTTGCAGTGGTGAAACTTATGCGTCACAGAGAAACCAAAGAACACGTTGCTGTCAAATTCATGGAACGGGGACATAAGATTCATGAAATGGTGGCAAGGGAAATCATAAACCATAGATCTCTTCGTCATCCCAATATTGTTAAGTTCAAAGAGGTAGCTCTGACTCCAACACATCTTGCAATAGTTATGGAGTATGCAGCTGGTGGAGAATTGTTTTACCATGTTCTTCACCAAAGAAGAATCGCAGAAGATCAAGCTCGATATTTCTTCCAGCAGTTGATCGCAGGAGTTAGTTATTGTCATGACATGGAAATATGTCATCGAGACTTGAAGTTGGAGAATACCTTGTTGGATGGAAGTCCAGCACATCGTCTTAAAATTTGTGATTTTGGCTATTCTAAGTCATGTCTAAATTATTCGAGGACTCATTCAATGGTAGGAACTCCAGCCTATATTGCACCAGAGATAATTTCTGGGAAAGATTATGATGGAAAGTTGGCAGATGTATGGTCCTGCGGAGTAATGCTTTATACAATGCTTGTAGGAACATTGCCATTTGAGGACAAAAATGATCGTCAAAATCTCCGAAAAATGGTTCAGCGAATTTCGGCTGTTCAATACGAGTTCCCCCACAATGTTTTAAGTGAAGGCAGTAAAAATCTGATATCTCGTATTTTTGTGGCAAATCCATCAAAGAGAATCACCATGGAAGAAATCAAGTCACATCCATGGTTTTTGAAGAACTTGCCTATGGAGTTATCAGAAGATGCTCACTATTTCTACCTCAATGAAGAAAATACAAAATATTGTGTTCAAAGTATAGAAGAAATCATGAACATTGTCAACGAAGCAAAAACCCCACCTGTTGCTTCCAGTCCAAATCTATAA 933 0.3891 MEKYELVEENIGDGRVAVVKLMRHRETKEHVAVKFMERGHKIHEMVAREIINHRSLRHPNIVKFKEVALTPTHLAIVMEYAAGGELFYHVLHQRRIAEDQARYFFQQLIAGVSYCHDMEICHRDLKLENTLLDGSPAHRLKICDFGYSKSCLNYSRTHSMVGTPAYIAPEIISGKDYDGKLADVWSCGVMLYTMLVGTLPFEDKNDRQNLRKMVQRISAVQYEFPHNVLSEGSKNLISRIFVANPSKRITMEEIKSHPWFLKNLPMELSEDAHYFYLNEENTKYCVQSIEEIMNIVNEAKTPPVASSPNL 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01148 310 Gene3D Transferase(Phosphotransferase) domain 1 81 268 - -
Viun3g01148 310 SUPERFAMILY Protein kinase-like (PK-like) 8 296 IPR011009 -
Viun3g01148 310 ProSiteProfiles Protein kinase domain profile. 5 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g01148 310 Pfam Protein kinase domain 8 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g01148 310 FunFam Serine/threonine-protein kinase SRK2A 81 268 - -
Viun3g01148 310 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Viun3g01148 310 PANTHER SERINE/THREONINE KINASE 2 283 - -
Viun3g01148 310 SMART serkin_6 5 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g01148 310 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01148 Viun-Chr3 7149857 7154251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01148 3 263 CBL-interacting serine-threonine protein kinases AT2G26980 42.910 6.85e-67 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Viun3g01148 Pkinase 1.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01148 K14498 - gmx:100787825 454.907