Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01123 ATGGAATTTCTCATGCAATCTCTGTTAATTACTGTGATCACCATGGTTGCATCTGTGTATGTTTTGCAGAAAAGAAGAACAGGTGGCACTAAAACCTTGCCCCCTGGTAGCTTTGGGTGGCCCCTAATGGGTGAAACCTTCCAATTTTTGTTCCTCAAGAGTGAACATTTCATTCAAGAAAGGGTCAAAAAGTACTCCTCACAGAACTTCCACACAAACATCCTAGGAGAGCCAACAGTGGTTCTTTCTGGTCCTGCAGCAAACAAATTTGTCTCCACCAACGAGACAAAGCTTCTCAAAGTTTGGTACATGAAGACTCAGCGCAGGTTCTTCAATATTCCTGACCAAAAAATACATGCACCAAAACAAGAACCTGCATCTTCAGCTCCAGTGAAGATCTTGGGGATTCTGAGACCTGAGGGAATAGCAAGGTACATGGGGAACAAGGTTGAATCAACCATGCATCAACATTTCACGACACACTGGGAAGGAAAAACAGAAGTGAAGGTGTACCCTTTGGTGAAGGCCTTTTCCCTCACACTGGCTTCTCAATTCTTCTTAGGCATTGATGAACCAAAATTGGCCACTGAGTTTGAGCACTTGTATTTTGGGATCTACTCTGCTCCTGTGAATTTCCCGGGCTCTTCATACCGTAGGGCACTCAAGGCTTCATCTGCAATAAGGAAAGAGATCCAATTTCTGATCAAAGAAAAGATTGAAGCTTTGTCCAAGGGACAAGTTGTGGATGACCTACTAGCACACGTAGTTGGTGCTGAGCAAGGTGGAAAATATGTGCCAAGAATTCAAATAAGCAACATCATCATGGGGATGATGAATTCAAGCCACATGCCAATAGCTATTACTCTGGCTTTCATGATCAAACACATTGGACAGAGGCCTGATATCTACCAAAAAATCGTATCCGAGCATGCTGGTGTTACAAAACTCAAAAGATCTGGTGCAGCACTAGACTGGGACAGCATACAGAAACTGAAATACACATGGGCTGTTGCACAGGAAACTATGAGACTCTATCCAACTGCACCAGGTGTGTTCAGAGAGGTCATAACAGATATCACATATGAAGGTTTTACTATTCCAAAAGGGTGGAAGATTTTTTGGTCACTGGTTGGGACAAATAAGGATCCGAACCACTTTCCAAAACCTGAAAGTTTTGACCCCTCAAGGTTTGAAGGGAATAATATTCTTCCTGCTCCATACACTTGGATACCCTTTGGAGCTGGACCAAGATCTTGCCCTGGACAAGACTACACGCGATTTGTGGTCCTCAATTTTATTCACATCCTAATAAACAAGTTCAAGTGGGAAGTTACAGTTCCAGATGAGAAAGTTTCAGAGGGTCTAATACCTACCCCAGCAGAGGGAGTATCAATCCGTCTTTATCACCGTTAA 1413 0.4317 MEFLMQSLLITVITMVASVYVLQKRRTGGTKTLPPGSFGWPLMGETFQFLFLKSEHFIQERVKKYSSQNFHTNILGEPTVVLSGPAANKFVSTNETKLLKVWYMKTQRRFFNIPDQKIHAPKQEPASSAPVKILGILRPEGIARYMGNKVESTMHQHFTTHWEGKTEVKVYPLVKAFSLTLASQFFLGIDEPKLATEFEHLYFGIYSAPVNFPGSSYRRALKASSAIRKEIQFLIKEKIEALSKGQVVDDLLAHVVGAEQGGKYVPRIQISNIIMGMMNSSHMPIAITLAFMIKHIGQRPDIYQKIVSEHAGVTKLKRSGAALDWDSIQKLKYTWAVAQETMRLYPTAPGVFREVITDITYEGFTIPKGWKIFWSLVGTNKDPNHFPKPESFDPSRFEGNNILPAPYTWIPFGAGPRSCPGQDYTRFVVLNFIHILINKFKWEVTVPDEKVSEGLIPTPAEGVSIRLYHR 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01123 470 Pfam Cytochrome P450 211 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01123 470 Gene3D Cytochrome P450 23 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01123 470 CDD CYP90-like 61 469 - -
Viun3g01123 470 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Viun3g01123 470 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01123 470 PRINTS E-class P450 group I signature 375 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01123 470 PRINTS E-class P450 group I signature 289 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01123 470 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01123 470 PRINTS E-class P450 group I signature 335 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01123 470 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01123 470 PRINTS P450 superfamily signature 298 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01123 470 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g01123 470 PANTHER CYTOCHROME P450 26 31 447 - -
Viun3g01123 470 SUPERFAMILY Cytochrome P450 32 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01123 Viun-Chr3 7005071 7007512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01123 32 372 Cytochrome P450 AT5G36110 32.493 1.81e-66 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01123 K20667 - var:108321875 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g01123 3 7005071 7007512 Viun3g01123 3 7005071 7007512 ECH