Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01067 ATGTCCAAACCCTGGGGCAACATCGGAGCATGGGCCGCCGATTCCGAGCGGGCCGAGGCGGAGGAGCGCGAGGCCCAGGCAGCGGCTGCGGCCGCCGAGACCCAAAACTTCCCCAGCCTCAAGGAGGCCGTCAACTCCAAGCCCAAGAAGAAGAAGGGTACAACAATCACGCTCTCTGAGTTCAACCGAGGCGGTTTTGCCTCCGCCGGAGAGTACCAGGGCCTCACACGCGACGAGATGATGGCGCTTCCGACAGGTCCCAAGGAACGCTCCGCCGAGGAAATGCAGTTCAACCGCCTCGGCGGCGGTTTCTCCTCATACGACCGCTCCGGCGGTCGCTCTCGCGACCGCGACGGCGGAAACAACGACGGCTCCTGGGGAGGCGGCGGGAGAAGATCCTACGGCGGATTCGACGAGGAACGCAGGGGTCCGAATCCTAGGGTTTCGGAACTCGATCAGCCTTCCAGGGCTGATGAGGTCGACAATTGGGCGTCCGTGAAGAAATCTGTCCCCGCGTTTGATTCTGGCCGGCAGAATCGCTATGGTGGAGGCGGTGGCGGGTTTGGTGGCGGCGGCGGCGGGTTTGGTAGCGGCGGTGGCGGTGGTTTTGGTGGTGGCGGGGGCGGTGGCGGCGGTGGTGGGTTTGGTGGTGCGTCTAGGGCTGATGGTGTGGATAATTGGGCGGTTGGTAAGAAGGCTGTTCCTGTTAGATCTTCCAATTTTGGTTCAGGTTTTCGTGATTCGGGAGTGGAGCCTGATCGTTGGTCGAGAGGTGGTCCGCCGCGTGAGACGGAGCGGATGGAGCGGCCGAGGCTGGTATTGGATCCGCCGAGGGGCGATGGATCGGTGAATGATTCTCCTGCGAAGGCGACAAACAAGGGCAATCCGTTCGGCGCGGCGAGGCCCAGGGAGGAGGTGTTGGCTGAGAAGGGATTGGATTGGAAGAAGATGGATTCAGAGATTGAGTCGAAGAAGACGAGCCGGCCCACGAGTTCTCACTCTAGCAGGCCTTCCAGTGCTCAGTCCAATCGCTCTGAGGGTCCCGGGTTGCAGGGGGTCGATGCTGTGCCGAAATCGAGGCCCAAGTTGAATCCGTTTGGGGATGCCAAACCTAGGGAGGTTCTGTTGGGTGAGCGAGGCATGGATTGGAGGAAAATTGATCTTGATTTGGAGCATCGCTCTGTTGACAGGCCTGAGACAATGGAGGAAAAATTATTAAAAGAAGAAATTGATAATTTGAAGAAGGAACTTGAGAAAGAGACTCCAATAAATTCAAACAAGGAATCTGAGGGTGAAGCTGGTATAGACCAAACCAGTAGATATGAAATATTACAACAGAAAGAAAAGGAGCTGGAAGTTCTTGTCCGTGATTTGGATGATAAAGTACGGTTTGGACAGAAAGCCGTTGAGAGGCCAGGTTCATCAGCAGGAAGGTCTTCTGGTTTTTCTGATAGGCCACCTTCTAGATCTGGTTCATTTGAGGATTCTAGAAGTGTAGATTATACAGATAGACCTCGATCTCGTGGTACAGGTACGGGAGATGTGTGGACCCGTCCTAATGATGACAGAAGACAGTTTCAAGGTAGTCGGGAAAGGGGGTGGTTTTCTGGCAGCAGAGATTTGAATAGGTCAAATTCAAGAGAGCGATGGTGA 1653 0.5572 MSKPWGNIGAWAADSERAEAEEREAQAAAAAAETQNFPSLKEAVNSKPKKKKGTTITLSEFNRGGFASAGEYQGLTRDEMMALPTGPKERSAEEMQFNRLGGGFSSYDRSGGRSRDRDGGNNDGSWGGGGRRSYGGFDEERRGPNPRVSELDQPSRADEVDNWASVKKSVPAFDSGRQNRYGGGGGGFGGGGGGFGSGGGGGFGGGGGGGGGGGFGGASRADGVDNWAVGKKAVPVRSSNFGSGFRDSGVEPDRWSRGGPPRETERMERPRLVLDPPRGDGSVNDSPAKATNKGNPFGAARPREEVLAEKGLDWKKMDSEIESKKTSRPTSSHSSRPSSAQSNRSEGPGLQGVDAVPKSRPKLNPFGDAKPREVLLGERGMDWRKIDLDLEHRSVDRPETMEEKLLKEEIDNLKKELEKETPINSNKESEGEAGIDQTSRYEILQQKEKELEVLVRDLDDKVRFGQKAVERPGSSAGRSSGFSDRPPSRSGSFEDSRSVDYTDRPRSRGTGTGDVWTRPNDDRRQFQGSRERGWFSGSRDLNRSNSRERW 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01067 550 Coils Coil 441 461 - -
Viun3g01067 550 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 549 IPR010433 GO:0003743
Viun3g01067 550 MobiDBLite consensus disorder prediction 330 348 - -
Viun3g01067 550 MobiDBLite consensus disorder prediction 303 329 - -
Viun3g01067 550 MobiDBLite consensus disorder prediction 250 275 - -
Viun3g01067 550 Pfam Plant specific eukaryotic initiation factor 4B 1 533 IPR010433 GO:0003743
Viun3g01067 550 Coils Coil 13 35 - -
Viun3g01067 550 MobiDBLite consensus disorder prediction 463 550 - -
Viun3g01067 550 MobiDBLite consensus disorder prediction 134 163 - -
Viun3g01067 550 MobiDBLite consensus disorder prediction 1 376 - -
Viun3g01067 550 MobiDBLite consensus disorder prediction 416 441 - -
Viun3g01067 550 MobiDBLite consensus disorder prediction 476 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01067 Viun-Chr3 6681829 6688399 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g01067 1 550 Eukaryotic Initiation Factors Gene Family AT3G26400 55.517 3.79e-150 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01067 - - gmx:100784238 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g01067 3 6681829 6688399 Viun3g01067 3 6681829 6688399 ECH