Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00986 ATGCAGAGAACAGAGTTCTCCCAAACACTTCAATCAAACATGGCTCTCTCACCTGTTGAAACCCCCAAGGTAGAAGAGAAGGTATCTTCAGAACACTATGAATGGTCACAGTGGGTGCTCAATGCCCCTGATCCCCCAACTACGTGGCACAAGCTCAAGGGTTCTGTGAGCAACACAATCTCACAGTACCGAGAAATGTGTTCTTCTCTAAGAACCCGAAATGGACCTAAAATTTTACTTTCTTTCTTGGGAGGCATTTTTCCCATTCTTCATTGGGCTCCAAATTATTCACCAACCAAGTTCCGAAACGACTTACTCGCTGGTCTAACCATAGCAAGTCTCTGCATTCCTCAGAGCATAGGGTATGCAACTTTAGCAAAGCTTGATCCTGAATATGGACTCTATACTAGTGTGGTGCCACCTCTTATGTATGCTTTGATGGGAAGTTCAAGAGAGATAGCAATTGGACCAGTGGCGGTGGTGTCACTTCTTTTGTCATCAATGATTGAGAAATTAACAGACCCTGCCATTGATCCAAATGGGTACAGAAAGCTTGTGTTCACTGCCACTTTCTTTGCTGGTATATTTCAAGCTGCTTTTGGAGTATTCAGGTTGGGTTTCCTTGTGGATTTTGTGTCTCATGCAGCCATTGTTGGGTTCATGGGTGGAGCAGCAATAATAATTGGTCTTCAACAGCTGAAGGGACTGTTTGGGATAAATCATTTTACAAACAAAACAGACATAATCTCTGTCATGAAATCCGTTTGGGAATCGGTTCATCATCCCTGGAATCCTCGGAACTTTGTGCTGGGATGTTCATTCTTCATTTTCATCCTGGTTACCAGATTTCTGGGTAAAAGGAATAAGAAACTGTTCTGGCTTCCAGCTATATCTCCTCTTTTATCAGTTCTGTTATCAACTCTTATAGTTTTTCTGACTAGAGCTGACAAAAGTGGTGTTAACATTGTGAGACATATAAAAGGAGGATTGAATCCGAGCTCTATCAATCAAATTGAGTTGAACACCCCACATATTGGAGCATTGGCCAAAACTGGATTATTTGTTGCTGCAGTTGCACTCACTGAATCAGTTGCTGTTGGGCGATCTTTTGCATCCATGAAAGGATATCACCTTGATGGAAACAAGGAAATGGTATCATTAGGCTTCATGAACATCATAGGATGCATGTCCTCTTGCTATGTTGCAACTGGTTCTTTCTCCCGCACAGTGGTTAATTTCACCGCGGGTTGTGAAACATTAGCGTCAAACATTGTGATGGCCACTGTAGTGATCATATCACTGCAATGTTTGACGAAGCTATTGTACTTTACACCAACTGCTATTCTGGCTTCAATAATCCTTTCAGCTCTTCCGGGACTCATAGACATCAACGAAGCTTACAAAATATGGAAAGTGGATAAGCTTGATTTTCTTGCTTGTGTTGGAGCCTTCTTCGGGGTGATCTTTGCGTCAGTGGAACTTGGTCTGCTAGTGGCCGTGGCAATATCTTTCACAAAGATAATTTGGATCTCGATTGGAGCAGGCACAGAAACTCTTGGAAGACTTCCAGGCACAGATCTGTTCTGCGATGTACAACAGTATCCTATGGCTGTTAAGACACCTGGGGTTGTAATAATACGCGTCAAGTCTGCATTGCTTTGCTTTTCTAATGCCAATTCAGTCAGAGAGAGGATCCTGAAATGGATCACTCGGGAAGATGCAAAGGGGAAAATAGAAGGCACCACCGGAAGCATAGTTCAGCTCGTAATCCTTGATACCTCTAATTTGGTGAGCATTGACACCTCAGGAATTGCTTCTCTAGAGGAACTCCGTAAGAGTTTGGTCTCAAGTGGAAAGCAGCTAGCAATTGCCAATCCTAGGTGGCAAGTGATTTACAAGCTAAAGGCAACCAACTTTGTCGCAAGAATTGGAGGAAGGGTCTTCTTGACTATTGGGGAAGCTATTGACTGCAATCTGGATTTCTAA 1986 0.4295 MQRTEFSQTLQSNMALSPVETPKVEEKVSSEHYEWSQWVLNAPDPPTTWHKLKGSVSNTISQYREMCSSLRTRNGPKILLSFLGGIFPILHWAPNYSPTKFRNDLLAGLTIASLCIPQSIGYATLAKLDPEYGLYTSVVPPLMYALMGSSREIAIGPVAVVSLLLSSMIEKLTDPAIDPNGYRKLVFTATFFAGIFQAAFGVFRLGFLVDFVSHAAIVGFMGGAAIIIGLQQLKGLFGINHFTNKTDIISVMKSVWESVHHPWNPRNFVLGCSFFIFILVTRFLGKRNKKLFWLPAISPLLSVLLSTLIVFLTRADKSGVNIVRHIKGGLNPSSINQIELNTPHIGALAKTGLFVAAVALTESVAVGRSFASMKGYHLDGNKEMVSLGFMNIIGCMSSCYVATGSFSRTVVNFTAGCETLASNIVMATVVIISLQCLTKLLYFTPTAILASIILSALPGLIDINEAYKIWKVDKLDFLACVGAFFGVIFASVELGLLVAVAISFTKIIWISIGAGTETLGRLPGTDLFCDVQQYPMAVKTPGVVIIRVKSALLCFSNANSVRERILKWITREDAKGKIEGTTGSIVQLVILDTSNLVSIDTSGIASLEELRKSLVSSGKQLAIANPRWQVIYKLKATNFVARIGGRVFLTIGEAIDCNLDF 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00986 661 Gene3D STAS domain 515 658 IPR036513 -
Viun3g00986 661 Pfam STAS domain 534 654 IPR002645 -
Viun3g00986 661 FunFam Sulfate transporter 31 514 660 - -
Viun3g00986 661 NCBIfam sulfate permease 88 647 IPR001902 GO:0016020|GO:0055085
Viun3g00986 661 ProSitePatterns SLC26A transporters signature. 130 151 IPR018045 GO:0008271|GO:0008272
Viun3g00986 661 ProSiteProfiles STAS domain profile. 553 658 IPR002645 -
Viun3g00986 661 PANTHER SULFATE TRANSPORTER 62 656 IPR001902 GO:0016020|GO:0055085
Viun3g00986 661 Pfam Sulfate permease family 101 481 IPR011547 GO:0016020
Viun3g00986 661 SUPERFAMILY SpoIIaa-like 538 656 IPR036513 -
Viun3g00986 661 CDD STAS_SulP_like_sulfate_transporter 534 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00986 Viun-Chr3 6063111 6069942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00986 27 656 Inorganic Solute Cotransporters AT5G10180 65.397 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00986 K17469 - gmx:100775538 1156.35