Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00980 ATGGCACTCTCACTGTGTTCCAGTGTTCGCGTTCCTTATTGCTCTCCTTCGTGTTTTTGGAAACCAAATGGTAAGAATTGCGAAGCGCCTACTAAGTTGCCATGTGCAGTTCACAGTAACAAGAATCCATTGGTTGGAATGGGTATTGGGTTGGTAACGGCTTGGGTGATGGGTTTAACGGCGTTGGACGCGGACGCCACAAGAATCGAATACTACGCCACCGTTGGAGAGCCTTTGTGTGAGTACAAGTATGTGAAGTCTGGCCTCGGTTACTGTGATATTGTTGAGGGCTTCGGTGTAGAAGCTCCACTCGGTGAGCTTATCAATGTTCACTATACTGCGAGATTTGCCGATGGAATAGTGTTTGATAGCAGCTATAAACGTGGTAGATCTCTCACCATGCGCATTGGTGTTGGCAAGGTAATCAGGGGACTGGATCAGGGAATTTTAGGGGGTGAAGGAGTACCTCCAATGCGGATAGGTGGGAAACGCAAACTGCAGATTCCTCCACAGTTAGCATATGGCCCTGAACCTGCGGGGTGCTTCTCAGGTGACTGCAACATACCCGCCAACGCCACTCTTCTGTATGATGTTAATTTTGTTGAGCTTTATTCGGGGAACAGATCAAGGTGA 633 0.4834 MALSLCSSVRVPYCSPSCFWKPNGKNCEAPTKLPCAVHSNKNPLVGMGIGLVTAWVMGLTALDADATRIEYYATVGEPLCEYKYVKSGLGYCDIVEGFGVEAPLGELINVHYTARFADGIVFDSSYKRGRSLTMRIGVGKVIRGLDQGILGGEGVPPMRIGGKRKLQIPPQLAYGPEPAGCFSGDCNIPANATLLYDVNFVELYSGNRSR 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00980 210 SUPERFAMILY FKBP-like 81 202 - -
Viun3g00980 210 Gene3D - 78 202 IPR046357 GO:0003755
Viun3g00980 210 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 105 204 IPR001179 GO:0003755
Viun3g00980 210 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 35 208 IPR044183 GO:0009507
Viun3g00980 210 FunFam Peptidylprolyl isomerase 77 203 - -
Viun3g00980 210 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 102 199 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00980 Viun-Chr3 6036099 6038348 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00980 81 205 Calmodulin-binding Proteins AT3G25230 38.583 9.68e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00980 K01802 - gmx:100500547 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00980 3 6036099 6038348 Viun3g00980 3 6036099 6038348 ECH