Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00959 ATGATTTTGATAGCAATTCTTTTAGCTTCTCTTGCTTTTCTGTGGCTTTGCAGAAGCAAGAAGAAGGCAAATAATTTACCACCTGGTCCCATTGGATTGCCAATTTTGGGAAGCCTTAACAAGTTGGGAGCAAATCCTCATCGGGATCTGCACCAACTAGCTCAGAAATATGGACCTGTCATGTTCTTACGCTTAGGTTTTGTGCCCACCGTTGTTGTTTCTTCACCCCAAGCTGCTGAACTCTTCCTCAAGACCCATGACCTTGTCTTTGCCAGTAGACCACGTTATCAAGCTCAAAAATTCGTCTCTTGGGGACAGAGGAACTTAGGCTTTGCTGAATATGGCTCTTATTGGCGCAACATGAGAAAGATGTGCACGTTGGAACTGCTAAGTCAAACCAAAATTAATTCCTTCAGAAGCATGAGGGAGGAGGAGCTTGACCTGTTGATCAAGCTTCTGAGAGAGGCAGCCAAGGATGGAGCTGCTGTTGATTTCAGTGCAAAGGTTTCAAAACTGAGCGCAGACATGGCTTGTAGAATGATTTTAGGGAAGAAGTACATGGACCAGGACTTGGATGAGAAGGGGTTCAAGGCTGTGATGCAAGAGGCGTTGCATTTAGTAGCAATTCCTAACATGGGAGATTACATTCCTTACATCGCTGCACTTGACCTTCAAGGGCTAACTAGGCGCTTGAAGGTGGTTCATAACATATTCGATGACTTCTTCGAGAAAATTATTGACGAACACATGGAATCAGAGCAGGGAGAAGAGAAAACAAAGGATTTCGTGGATGTGATGTTGGGTTTTTATGGTACTGAAAATTCTGAATACCGCATTGAACGAGACAATATTAAAGCCATACTGATGGATATGTTGGCTGGGTCAGTGGACACTTCTGCTACATCAGTAGAGTGGACACTTTCGGAGCTGCTAAAGAATCCAAGGGTGATGAAGAAACTTCAAACGGAATTGGAAAGCGTGGTGGGTATGGAGAGGAAGGTGGAAGAATCAGACTTAGAGAAGTTAGAGTATTTGGATATGGTTATAAAGGAAAGTCTGAGACTTCATCCAGTGGCACCTTTGCTGATACCACACCAGTCCATAGAAGACTGCATGGTTGGAGATTATTTTATTCCTAAAAAATCAAGGGTTATAGTGAATGCATGGGCTATTATGAGGGACCCAAGTGCTTGGGATGATGCAGAAAAGTTCTGGCCAGAGAGATTTGAAGGAAGGAACATAGATGTTCGAGGGAGTGAGTTTGAGCTGATACCGTTTGGGTCTGGCAGAAGGCGATGTCCAGGAATGCAACTTGGTCTAACTGTGGTTCGTGAGACAGTGGCTCAACTTGTCCATTGTTTTGATTGGAAACTGCCAAATGACGTGTTGGAAGAAGAGTTGGACATGACAGAGAAGTTCGGACTCACAATGCCAAGGGCCAATCATCTATTTGCCATTCCTACCTATCGACTTTCCCATGAAAGGGATTGTTAG 1494 0.4404 MILIAILLASLAFLWLCRSKKKANNLPPGPIGLPILGSLNKLGANPHRDLHQLAQKYGPVMFLRLGFVPTVVVSSPQAAELFLKTHDLVFASRPRYQAQKFVSWGQRNLGFAEYGSYWRNMRKMCTLELLSQTKINSFRSMREEELDLLIKLLREAAKDGAAVDFSAKVSKLSADMACRMILGKKYMDQDLDEKGFKAVMQEALHLVAIPNMGDYIPYIAALDLQGLTRRLKVVHNIFDDFFEKIIDEHMESEQGEEKTKDFVDVMLGFYGTENSEYRIERDNIKAILMDMLAGSVDTSATSVEWTLSELLKNPRVMKKLQTELESVVGMERKVEESDLEKLEYLDMVIKESLRLHPVAPLLIPHQSIEDCMVGDYFIPKKSRVIVNAWAIMRDPSAWDDAEKFWPERFEGRNIDVRGSEFELIPFGSGRRRCPGMQLGLTVVRETVAQLVHCFDWKLPNDVLEEELDMTEKFGLTMPRANHLFAIPTYRLSHERDC 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00959 497 CDD CYP71-like 56 483 - -
Viun3g00959 497 Pfam Cytochrome P450 27 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00959 497 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00959 497 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00959 497 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00959 497 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00959 497 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00959 497 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00959 497 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00959 497 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00959 497 FunFam Cytochrome P450 83B1 14 486 - -
Viun3g00959 497 Gene3D Cytochrome P450 15 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00959 497 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00959 497 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00959 497 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00959 497 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00959 497 SUPERFAMILY Cytochrome P450 27 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00959 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Viun3g00959 497 PANTHER CYTOCHROME P450 93A3-LIKE 3 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00959 Viun-Chr3 5892331 5894476 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00959 18 486 Cytochrome P450 AT3G48310 40.127 8.67e-131 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00959 K20562 - gmx:100809526 830.861