Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00958 ATGTGGGGTTTCATCTTCATAAAAGCACACTCTAGAAATCATTACTGTCACAATCTGCATTACTTTAAAGAAACCTTTTGCTTACTTTTAAGCCTAGTTGCTCCTTTAGTACAGTTTAAAATCTCGCAAAAAGCTTGGATGATTTGGTTACCACTTCTTGCAGTTTTTCTTACTTACTTGTGGCTATGGAGAAGAAGCAAGAAAAATGGAAAGAGGTTACCACCTGGTCCAAAAGGGTTTCCTATTTTGGGGAGTCTTCACATGTTGGGGGCACACCCTTATCGTGATCTACACCAACTAGCTCAAAAGTATGGACCTATCATGCACTTGCGCTTGGGTTTTGTGCCCACCATTGTTGTTTCTTCACCCAAAGCTGCTCAACTCTTCCTCAAGACCCATGATCTGATCTATGCCGGTAGACCACCTCACGAAGCTGCAAAGTACATCTCATGGGGGCAGAGGAACCTGGCTTTTGCTCAATATGGTTCTTACTGGCGCAACATTCGTAAGATGTGCACGTTGGAACTCCTAAGCCAAGCCAAAATTAACTCCTTTAGACCCCTGAGGGAAGCAGAGCTAGACCTGTTGGTGAAGCATCTGAGAGAGGCAGCCATGGATGGAGCTGTGGTTGATCTCAGTGCCAGAGTTGCAGCACTCAGTGCAGACACAGCTTGCAGAATGATTTTAGGGAAGAAGTACATGGATAAGGAGTTGGATGAGAAGGGTTTCAAGGCTGTGATGCAAGAGTTAATGTACTTGGCAGCAACTCCTAACATAGGAGATTACATTCCTTACATCGGTAAACTTGACCTTCAGGGGCTAATCAAGCGTATGAAGGCGATGCGCAAAATCTTTGATGAATTCTTCGACAAAATCATCGATGAGCATATTGAATCAAAGAAGGGGGAGGAGGAGGTGAAGGATTTTGTCGATGTCATGTTGGGATTTCTCGGTACCGAACAATCGGAGTACTGCGTTGAAAGACCCAATATCAAAGCCATATTGCTGGATATGTTGGCTGGTTCAATAGATACTTCTGCTACAGCAATAGAGTGGGCACTTTCGGAGCTGATAAAGAATCCAAGGGTGATGAAGAAGGTCCAAAAGGAACTGGAAATCGTGGTGGGTATGAAGAGGAAGGTGGAAGAATCAGACATAGAGAAGTTAGAGTATCTGGACATGGTTATAAAGGAAAGCCTGAGACTTCATCCAGTGGCACCGTTGCTGATACCACACGAGTCAAGGGAAGATTGCATGGTTGGAGAGTTTTTCATTCCTAAAAAGTCAAAGGTGATAGTGAATGCATGGGCTATTATGAGAGACCCAAGTGCCTGGGTTGATGCAGAAAAGTTCTGGCCTGAGAGATTTGAAGAAAGGAACATAGATATGAAAGGGCATGAGTTTGAGCTGATACCATTTGGATCTGGAAGAAGAAGGTGTCCAGGAATGCAACTGGGTCTAACTGTGGTTCGTCAGACAGTGGCACAAGTTGTCCATTGTTTTGATTGGAAGCTTCCCAACAACATGTTACCTTCGGATTTGGATATGACAGAGGAGTTTGGACTCGCAATGCCAAGGGCCAATCATCTTCTTGCCATTCCCACTCACCGCCTTCACAGTCACATTGATTGA 1632 0.4442 MWGFIFIKAHSRNHYCHNLHYFKETFCLLLSLVAPLVQFKISQKAWMIWLPLLAVFLTYLWLWRRSKKNGKRLPPGPKGFPILGSLHMLGAHPYRDLHQLAQKYGPIMHLRLGFVPTIVVSSPKAAQLFLKTHDLIYAGRPPHEAAKYISWGQRNLAFAQYGSYWRNIRKMCTLELLSQAKINSFRPLREAELDLLVKHLREAAMDGAVVDLSARVAALSADTACRMILGKKYMDKELDEKGFKAVMQELMYLAATPNIGDYIPYIGKLDLQGLIKRMKAMRKIFDEFFDKIIDEHIESKKGEEEVKDFVDVMLGFLGTEQSEYCVERPNIKAILLDMLAGSIDTSATAIEWALSELIKNPRVMKKVQKELEIVVGMKRKVEESDIEKLEYLDMVIKESLRLHPVAPLLIPHESREDCMVGEFFIPKKSKVIVNAWAIMRDPSAWVDAEKFWPERFEERNIDMKGHEFELIPFGSGRRRCPGMQLGLTVVRQTVAQVVHCFDWKLPNNMLPSDLDMTEEFGLAMPRANHLLAIPTHRLHSHID 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00958 543 SUPERFAMILY Cytochrome P450 74 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00958 543 FunFam Cytochrome P450 83B1 61 533 - -
Viun3g00958 543 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 473 482 IPR017972 GO:0005506|GO:0016705
Viun3g00958 543 CDD CYP71-like 103 530 - -
Viun3g00958 543 PRINTS P450 superfamily signature 394 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00958 543 PRINTS P450 superfamily signature 480 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00958 543 PRINTS P450 superfamily signature 471 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00958 543 PRINTS P450 superfamily signature 341 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00958 543 Gene3D Cytochrome P450 63 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00958 543 PANTHER CYTOCHROME P450 93A3-LIKE 49 539 - -
Viun3g00958 543 PRINTS E-class P450 group I signature 393 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00958 543 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00958 543 PRINTS E-class P450 group I signature 330 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00958 543 PRINTS E-class P450 group I signature 219 237 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00958 543 PRINTS E-class P450 group I signature 101 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00958 543 PRINTS E-class P450 group I signature 350 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00958 543 PRINTS E-class P450 group I signature 434 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00958 543 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00958 543 Pfam Cytochrome P450 74 526 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00958 Viun-Chr3 5889183 5891176 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00958 80 538 Monolignol Biosynthesis Gene Families AT4G36220 42.767 1.72e-130 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00958 K20562 - vun:114179959 1107.43