Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00944 ATGGATTTCTTCTACTTTGAAAACCCTCACCCTTCCAACTCTCATGATCATCATCTTCATAACAACATGCCTCCATCATCCCCTGAGATCGCACTCTCCGATTTCCTCCTTCTCGATGATTTCCTTCATCATCATCATCATCATGGAGACTCTCCACCATCATCACAAAGCACTGAGTCTTCGGAAAAACCAACCTTCAGTGATACCACTCATGGATTCACCACTGGTGCAACCTCTAAGAACAACAACAACAACATAAAGTGCAAGAACGCGAATAGTGGAAGCAAAGCAAGGTTGGGTCCAAGAATCGCGTTCAGAACTCAATCAGAGCTTGAGATCATGGATGATGGATACAAGTGGAGGAAGTATGGTAAGAAGTCCGTGAAGAGCAGTCCAAATCTAAGGAACTATTACAAGTGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGAAAGGGACAGAGAGGATTCCAGCTATGTGATAACAACATATGAAGGTGTACACAATCATCAGAGTCCTTTTACCACATACTATAGTCCTATCTCTTTTCTACATTCTGATGATTCTACATCTTCAAAATGA 585 0.4222 MDFFYFENPHPSNSHDHHLHNNMPPSSPEIALSDFLLLDDFLHHHHHHGDSPPSSQSTESSEKPTFSDTTHGFTTGATSKNNNNNIKCKNANSGSKARLGPRIAFRTQSELEIMDDGYKWRKYGKKSVKSSPNLRNYYKCSSGGCSVKKRVERDREDSSYVITTYEGVHNHQSPFTTYYSPISFLHSDDSTSSK 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00944 194 ProSiteProfiles WRKY domain profile. 109 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun3g00944 194 MobiDBLite consensus disorder prediction 45 93 - -
Viun3g00944 194 MobiDBLite consensus disorder prediction 53 92 - -
Viun3g00944 194 Pfam WRKY DNA -binding domain 115 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun3g00944 194 FunFam WRKY transcription factor 57 100 174 - -
Viun3g00944 194 SUPERFAMILY WRKY DNA-binding domain 106 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun3g00944 194 Gene3D WRKY domain 101 167 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun3g00944 194 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 40 177 IPR044810 GO:0003700
Viun3g00944 194 SMART WRKY_cls 114 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00944 Viun-Chr3 5783092 5784410 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00944 87 182 WRKY Transcription Factor Family AT5G64810 62.376 2.56e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun3g00944 WRKY 3e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00944 - - gmx:100500248 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00944 3 5783092 5784410 Viun3g00944 3 5783092 5784410 ECH