Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00934 ATGGGAGATGAAAAGCCTTTTGACTTCTTACGCACTTTATTTGAGGGCGTTATTGCAGGAGGTACAGCTGGAGTTGTTGTTGAAACAGCTTTATACCCAATCGACACCATTAAAACACGCCTGCAGGCTGCTCGTGGGGGAGAAAAACTAATATTGAAAGGCTTGTATTCCGGATTGGCAGGAAACCTTGCTGGTGTCTTACCGGCGTCTGCTTTATTTGTGGGAGTTTATGAACCTATAAAGCAGAAATTGCTGAGGATATTTCCTGAAAATCTGAGTGCTTTAAGTCATTTAACTGCAGGTGCCATAGGGGGCATTGCTGCTTCATTGATTCGTGTTCCAACAGAGGTTATCAAGCAACGAATGCAAACTGGGCAGTTTACTTCAGCTTCTAGTGCCGTTCGCTTTATTGCTTCTAAGGAAGGCTTTAAAGGATTTTATGCTGGGTATGGATCTTTTTTGTTGCGAGATTTACCCTTTGATGCTATTCAATTTTGCATCTATGAGCAGATTCGAATAGGTTATATGCTTGCGGCACGAAGAAATCTGAATGATCCAGAAAATGCAATTATTGGTGCTTTTGCAGGTGCACTAACTGGAGCCATAACTACTCCCCTTGATGTCATCAAGACAAGGTTAATGGTTCAAGGATCTGCAAACCAATATAAGGGAATTGCTGACTGTGTTCAAACTATTATTAAGGAAGAAGGACCTCGCGCCTTTTTGAAGGGTATTGGTCCCAGAGTACTATGGATAGGCATAGGTGGTTCAATATTCTTTGGTGTCCTTGAGAGTACAAAACGTTTTCTTGCTGAGAGGCGTCCTATAGTATCTCAGCACACATACTCAGACAGAAGTAAAGATAAATAG 870 0.4184 MGDEKPFDFLRTLFEGVIAGGTAGVVVETALYPIDTIKTRLQAARGGEKLILKGLYSGLAGNLAGVLPASALFVGVYEPIKQKLLRIFPENLSALSHLTAGAIGGIAASLIRVPTEVIKQRMQTGQFTSASSAVRFIASKEGFKGFYAGYGSFLLRDLPFDAIQFCIYEQIRIGYMLAARRNLNDPENAIIGAFAGALTGAITTPLDVIKTRLMVQGSANQYKGIADCVQTIIKEEGPRAFLKGIGPRVLWIGIGGSIFFGVLESTKRFLAERRPIVSQHTYSDRSKDK 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00934 289 Pfam Mitochondrial carrier protein 187 272 IPR018108 -
Viun3g00934 289 Pfam Mitochondrial carrier protein 13 47 IPR018108 -
Viun3g00934 289 Pfam Mitochondrial carrier protein 92 173 IPR018108 -
Viun3g00934 289 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 83 IPR018108 -
Viun3g00934 289 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 15 282 - -
Viun3g00934 289 SUPERFAMILY Mitochondrial carrier 14 264 IPR023395 -
Viun3g00934 289 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 9 274 - -
Viun3g00934 289 ProSiteProfiles Solute carrier (Solcar) repeat profile. 92 174 IPR018108 -
Viun3g00934 289 Gene3D Mitochondrial carrier domain 13 283 IPR023395 -
Viun3g00934 289 PRINTS Mitochondrial carrier protein signature 16 29 IPR002067 GO:0055085
Viun3g00934 289 PRINTS Mitochondrial carrier protein signature 192 214 IPR002067 GO:0055085
Viun3g00934 289 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Viun3g00934 289 PRINTS Mitochondrial carrier protein signature 147 165 IPR002067 GO:0055085
Viun3g00934 289 ProSiteProfiles Solute carrier (Solcar) repeat profile. 187 269 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00934 Viun-Chr3 5730458 5738753 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00934 90 275 Chloroplast and Mitochondria Gene Families AT1G07030 30.890 6.31e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00934 K15111 - gmx:100811130 518.464