Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00932 ATGGGTCCCTTTACACTCTCCGTTATGGTTAATGACTCTGCCATTTCATTACCAGATGCTTGTTCGAAGAGAAAACAGAACTTGCTTCTGAAAAATTCTTTTGCATCAGTTAGCATGGGAGATGAAAAGCCTTTTGACTTCTTACGCACTTTATTTGAGGGCGTTATTGCAGGAGGTACAGCTGGAGTTGTTGTTGAAACAGCTTTATACCCAATCGACACCATTAAAACACGCCTGCAGGCTGCTCGTGGGGGAGAAAAACTAATATTGAAAGGCTTGTATTCCGGATTGGCAGGAAACCTTGCTGGTGTCTTACCGGCGTCTGCTTTATTTGTGGGAGTTTATGAACCTATAAAGCAGAAATTGCTGAGGATATTTCCTGAAAATCTGAGTGCTTTAAGTCATTTAACTGCAGGTGCCATAGGGGGCATTGCTGCTTCATTGATTCGTGTTCCAACAGAGGTTATCAAGCAACGAATGCAAACTGGGCAGTTTACTTCAGCTTCTAGTGCCGTTCGCTTTATTGCTTCTAAGGAAGGCTTTAAAGGATTTTATGCTGGGTATGGATCTTTTTTGTTGCGAGATTTACCCTTTGATGCTATTCAATTTTGCATCTATGAGCAGATTCGAATAGGTTATATGCTTGCGGCACGAAGAAATCTGAATGATCCAGAAAATGCAATTATTGGTGCTTTTGCAGGTGCACTAACTGGAGCCATAACTACTCCCCTTGATGTCATCAAGACAAGGTTAATGGTTCAAGGATCTGCAAACCAATATAAGGGAATTGCTGACTGTGTTCAAACTATTATTAAGGAAGAAGGACCTCGCGCCTTTTTGAAGGGTATTGGTCCCAGAGTACTATGGATAGGCATAGGTGGTTCAATATTCTTTGGTGTCCTTGAGAGTACAAAACGTTTTCTTGCTGAGAGGCGTCCTATAGTATCTCAGCACACATACTCAGACAGAAGTAAAGATAAATAG 984 0.4157 MGPFTLSVMVNDSAISLPDACSKRKQNLLLKNSFASVSMGDEKPFDFLRTLFEGVIAGGTAGVVVETALYPIDTIKTRLQAARGGEKLILKGLYSGLAGNLAGVLPASALFVGVYEPIKQKLLRIFPENLSALSHLTAGAIGGIAASLIRVPTEVIKQRMQTGQFTSASSAVRFIASKEGFKGFYAGYGSFLLRDLPFDAIQFCIYEQIRIGYMLAARRNLNDPENAIIGAFAGALTGAITTPLDVIKTRLMVQGSANQYKGIADCVQTIIKEEGPRAFLKGIGPRVLWIGIGGSIFFGVLESTKRFLAERRPIVSQHTYSDRSKDK 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00932 327 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 32 312 - -
Viun3g00932 327 SUPERFAMILY Mitochondrial carrier 52 302 IPR023395 -
Viun3g00932 327 Pfam Mitochondrial carrier protein 51 85 IPR018108 -
Viun3g00932 327 Pfam Mitochondrial carrier protein 130 211 IPR018108 -
Viun3g00932 327 Pfam Mitochondrial carrier protein 225 310 IPR018108 -
Viun3g00932 327 Gene3D Mitochondrial carrier domain 44 321 IPR023395 -
Viun3g00932 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 49 121 IPR018108 -
Viun3g00932 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 130 212 IPR018108 -
Viun3g00932 327 PRINTS Mitochondrial carrier protein signature 230 252 IPR002067 GO:0055085
Viun3g00932 327 PRINTS Mitochondrial carrier protein signature 54 67 IPR002067 GO:0055085
Viun3g00932 327 PRINTS Mitochondrial carrier protein signature 67 81 IPR002067 GO:0055085
Viun3g00932 327 PRINTS Mitochondrial carrier protein signature 185 203 IPR002067 GO:0055085
Viun3g00932 327 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 53 320 - -
Viun3g00932 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 307 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00932 Viun-Chr3 5730458 5738759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00932 128 313 Chloroplast and Mitochondria Gene Families AT1G07030 30.890 9.90e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00932 K15111 - gmx:100811130 586.26