Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00892 ATGAAAGGAAACAAGCCTTATCTAGTTGTGATCCTCATACAAGCCATCTATGCTGCCATGTTTCTGCTCTCAAAAGCAGCATTTGACCATGGCATGAACAATTTCATCTTTGTCTTCTATAGACAGACCGCAGCCACCATATTCCTCATCCCTTTCGCTTTCTTCTTTCAATGGAAAACTGCACCCCCTTTGTCGTTCCTGGCCTTCTGCAAGATCTTTTTTCTTTCTTTTCTGGGGATCACTGCCAGCTTGGACATATATGGTATTGCCCTTGTTTACACTTCTGCTACTTTGGCTGCTTCTATCACAAACTGTCTCCCAGTCATCACCTTTTTCTTAGCGTTGCTGTTCAGGATAGAAGTTTTGAAGGTAAAGAGTGCCCCTGGTGTTGCTAAGTTGGTTGGAGTAGTGGCATGCTTAACTGGAGCAGCAACCCTTGCTTTCTATAAAGGTCCTCATTTGGAACTTTTAAGCCATTATAACCTTTTAGGGTACCATAAAAACCAACAACACCTGGGTCATGTTGCATCTCGTTCATGGATAAAGGGTTGCTTCCTCATGCTCCTCTCCAGCACCTTTTGGGGAGTGTGGCTTGTGCTACAGACTTTTGTCATAAAAGACTACCCTTCAAAGCTGCTCCTCACAACTCTTCAGTGTTTCTTAAGTTCGATTCAGTCTTTGGGCATTGCCTTGGCAGTAGAAAGAAACATTGAGCAATGGAAATTAGGGTGGAATGTCAGACTCCTTGCTGTTGTTTACTGCGGAATTATGGTGACTGGTGTAACATATTACTTACAAGCATGGGTTATAGAGAAGAAAGGACCAGTGTTTCTGGCCATGGCAACACCACTGTCTCTCATAATGACCATCTTCTCCTCCACATTTATCTTGGGCGAAATAATAACTTTGGGAAGCCTTTTAGGAAGCATCGCTTTGGTTATTGGACTTTACTGTGTGCTGTGGGGAAAGAGCAGAGAGCAAATGCCAAAAGTTTCCTCGGATATGGAGGAGGCACCATCGAGTTAG 1026 0.4366 MKGNKPYLVVILIQAIYAAMFLLSKAAFDHGMNNFIFVFYRQTAATIFLIPFAFFFQWKTAPPLSFLAFCKIFFLSFLGITASLDIYGIALVYTSATLAASITNCLPVITFFLALLFRIEVLKVKSAPGVAKLVGVVACLTGAATLAFYKGPHLELLSHYNLLGYHKNQQHLGHVASRSWIKGCFLMLLSSTFWGVWLVLQTFVIKDYPSKLLLTTLQCFLSSIQSLGIALAVERNIEQWKLGWNVRLLAVVYCGIMVTGVTYYLQAWVIEKKGPVFLAMATPLSLIMTIFSSTFILGEIITLGSLLGSIALVIGLYCVLWGKSREQMPKVSSDMEEAPSS 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00892 341 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 150 - -
Viun3g00892 341 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020
Viun3g00892 341 Pfam EamA-like transporter family 5 131 IPR000620 GO:0016020
Viun3g00892 341 PANTHER WAT1-RELATED PROTEIN 5 330 IPR030184 GO:0016020|GO:0022857
Viun3g00892 341 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00892 Viun-Chr3 5494860 5498518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00892 1 254 Nodulin-like Gene Family AT5G64700 60.853 1.11e-96 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00892 - - gmx:100775854 602.823