Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00881 ATGGAGTTCCTGGACGAGGACGCGAGGCCAAGGTTCGTGTTCCAGTCCGGTGCCGTTGCAAGCACCGAACCACCGCACCCGGACCTCAAACCTACCAAGCCGTTCCTCTTCGTCACCATTTCTCTCTCTTCGCTCTTCCTCGCTCTATCTCTCTTCTTCCTCGAATCCGAGCCCTTCAAATCGCTCCTATTCTGGCTCGCGCTCTCTCTCCTCATCGGCCCCTTCGCTCCCCCGTCCCTCACCGGCGGAGACGTCCGCGTCGGCCTCGGCGAGGTCGTCAACTTCCCTGATCCGGAGCCCGAAACCGACGACGACGCTAGGAAGCCTTCGCAGCGGCGATCCAGACAGCGGAGGCCCGAGGAAGTCGCCGCCATCGGTCCAGTGGTGTCCGTCGGCGCGGCGGAGAAGAGAGGGGGAGGCGGCGGAGTGGAGAAGGTTGCGACGGTGGTGGAGGAGAAGGATTGGAGAGAGGAGGATGTGGAGGTGCTGAAGAAGCAGCTGGTGAAGAATCCGGTGGGGAAGCCGGGGCGGTGGGAGGCGATAGCGGCGGCGTTCGGCGGAAGGCACGGTGTGGAGAGTGTGATAAAGAAGGCGAAGGAGTTGGGGGAGAAGAAAGTGGATGATTCGGATTCTTATGCATTGTTCTTGAAAAATAGGAAGACGTTGGATAAGAGGGTTGTGGAGGAGAATGGGGGTGAGGATTCGGTGACGGTGGATAAAGCTGTTGATAATGGTTGGAGTTCTGGGGAGGATATCGCGTTGCTGAATGCATTGAAAGTTTTTCCTAAGGATGTCTCAATGAGGTGGGAGAAGGTTGCTGCGGCGGTTCCCGGGAGATCCAAAGCTGCTTGCATGAGAAGATTTACTGAATTGAAGAAAGGGTTTCGGAATGCAAAAGCTGCAAACGAGTGA 912 0.5746 MEFLDEDARPRFVFQSGAVASTEPPHPDLKPTKPFLFVTISLSSLFLALSLFFLESEPFKSLLFWLALSLLIGPFAPPSLTGGDVRVGLGEVVNFPDPEPETDDDARKPSQRRSRQRRPEEVAAIGPVVSVGAAEKRGGGGGVEKVATVVEEKDWREEDVEVLKKQLVKNPVGKPGRWEAIAAAFGGRHGVESVIKKAKELGEKKVDDSDSYALFLKNRKTLDKRVVEENGGEDSVTVDKAVDNGWSSGEDIALLNALKVFPKDVSMRWEKVAAAVPGRSKAACMRRFTELKKGFRNAKAANE 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00881 303 Coils Coil 301 303 - -
Viun3g00881 303 SUPERFAMILY Homeodomain-like 151 191 IPR009057 -
Viun3g00881 303 FunFam Myb family transcription factor 240 300 - -
Viun3g00881 303 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 136 301 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Viun3g00881 303 MobiDBLite consensus disorder prediction 91 121 - -
Viun3g00881 303 ProSiteProfiles SANT domain profile. 241 296 IPR017884 -
Viun3g00881 303 Gene3D - 239 303 - -
Viun3g00881 303 ProSiteProfiles Myb-like domain profile. 246 292 IPR001005 -
Viun3g00881 303 MobiDBLite consensus disorder prediction 100 120 - -
Viun3g00881 303 Gene3D - 150 207 - -
Viun3g00881 303 CDD SANT 246 292 IPR001005 -
Viun3g00881 303 SMART sant 242 294 IPR001005 -
Viun3g00881 303 SMART sant 151 204 IPR001005 -
Viun3g00881 303 SUPERFAMILY Homeodomain-like 242 293 IPR009057 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun3g00881 Myb_DNA-binding 2.1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00881 - - gsj:114413206 446.432