Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00842 ATGGCAAAGGAAACTGCATTGGCGTTTGATGTAAACGAAACGAAACCTATAATATGCTACGCAGCCACCATGATAACATCAGAAGGGGTTTGGAATAAGCAAAACCCCTTGAACTATTCTCTGCCTCTCTTTCTCTTGCAATTAGTGTTAGTTCTCGTTGTCACCCGTCTATTTGTGTACGTACTCAAGCCCATTCGCCAGCCACGAGTTATTTCTGAACTCATGGGAGGCATAATATTGGGTCCTTCGGTGCTTGGGAAAAACCAAACATTTTCTGATGCAGTTTTTCCTCAAAGAGGTGAGATCTTGCTTGAAACAATGGCAAACGTTGGCATCGTATATTTTATGTTCTTGGTGGGAGTGGGGATGGATGCAGCATCGTTGAGACGCATAGGGAGAAAAGCAGTGACCATAGCAGTTCTAGGCATGATCCTACCTTTCGCAGTTGGAGCTGTGTTCTCTGCGTATTTGATAAAATTCAACGGAGTAGCAGAAAGAAGCACCGCTAACATCCTATTCATTGGTTCAATTCTTTCTGTGGCAGCGTTTCCAGTTCTTGTGAGAATCCTTGCAGAGCTGAAATTCATCAACTCTGAGTTGGGAAGGATTGCTCTTTCATCTGCACTGGTTAATGATCTGCTTTCATGTCTGCTCTTGGTTCTTTCTGTTAATTTGGCACAGCGTAATACGCCTTCTATCACTCTGTTGCCGACTTTCTTGGCAAGTATAGGGTTTATTGTTTTTAATATTTTTGTGGTGAGACCTTTGATGTTGTGGATGGTGAGGAAAACCCCGGAGGGTGAAACCTTCAGTGATTTCTATATGTGCATAATATTAGCAGGTGTGATGCTCTCAGGTTTGATCACAGATGCTATTGGAACACATGCAGTTTTTGGAGCCTTTGTATTTGGTTTGACAATCCCACATGGACCTCTAGGGCTCTCTCTTGTGGAAAGGCTAGAGGACTTTATAACGTTGCTTTTGCTCCCTCTATTTTTCGCCTCCACTGGCCTAAAAACTGATCTTGGACTGCTCGATAACTTCCAAGAATGGGCAACTTTGGTCACTCTTGTTATTTTGGCTTGCGTTGGCAAAATCATTGGCACTGTGATCGCTGCACTCTATTATCAAATATCAGTTCGTGATGGAGCAGTCCTTGGTTTGCTCCTCAACACAAAAGGCGTTGTTGAAATTATTGTCATTAACATTGGCAAGGATCAAAAGGTTTTGACCAGCGAATCCTTTGCAACCTTGATGCTTATAAGCGTGCTAATGACAGCAATCATTGTACCTGGGATGTCACTTATATACAAACCAGTAAGGGGAGTGATACCTTACAAAAGAAGAACCATTCAATTGTCACAAAAGGAATCAGAGTTCAGAGTCCTAGTTTGTATCCACACTCCTCGAAATGTGCCCACAATGATTAACCTCCTTGACGCCACTAACCCTTCAAAGAAGTCCCCAATATGCATTTACATGGTCCATTTGACCGAACTCAGTGGCCATGCATCTGCATTAATCCTCGTTCAGCATCATACCTCCAAGGATTCAGACCATCCAGCCTGTAACAAGACTCAAGCTCAATCTGAACACATAGTCAATGCCTTTCGAAACTACGAGCTTCAAGCTTCCAACGTCTCAGTGCAGCCCTCGACAGTAATCTCCCCTTACTCCACCATGCACGAGGACGTATGCAACCTGGCTCAGGAAAAGCGTGTGGCCTTCATCATCGTCCCTTTCCACAAACATCAAACGGTTGATGGTGAAATGGAGCCCACCAACATGTCACACCGCAGTGTGAACATCAATATACTAAGCCAAGCACCTTGCTCCGTTGGGATTCTAGTGGATAGAGGCTTTAATACCAGCACCCATCTGGGTCCAGATCAACAAAAGTCTCACAATGTGGCAGTGTTGTTCTTTGGAGGGCCTGATGATAGAGAAGCCCTGAGCTATGCATGGAGGATGTCAGAAAATCCAGGGGTAAACCTTACTCTGATGCGTTTTGTTTATGCGGAAGAAGTATTGCATCAACATAGTGATCACAGCCCTGACGAAAGTACGGTACTGACAGTGAACACGGATAAGGACAATCAGAAAAAACTTGATGACAGGCTTATAAGTTGGTTTAGGACAAGCCGTGAGAATGATGCCTCAGTTGTTTATATGGAGAAAATGGTGAACAATGGAGAGCAGACAGTAGCAGCAATAAGGTCAATGGATGATGTTCACGACCTTTTCATAATTGGGAGAGGCGAAGAAATGAAATCACCACTCATAGCAGGACTCACTGATTGGAGTGAATGTCCTGAGTTAGGGGCAATTGGGGACTTGTTGGCTTCATCAGATTTTGCAGCCACTGCTTCTGTGTTGATAGTGCAACAATATCTTGGGGAAGGAATGGAAGAAGATATTTTGGAAACAGACCAGGATGAGCAGACATTAACACCATGA 2457 0.4387 MAKETALAFDVNETKPIICYAATMITSEGVWNKQNPLNYSLPLFLLQLVLVLVVTRLFVYVLKPIRQPRVISELMGGIILGPSVLGKNQTFSDAVFPQRGEILLETMANVGIVYFMFLVGVGMDAASLRRIGRKAVTIAVLGMILPFAVGAVFSAYLIKFNGVAERSTANILFIGSILSVAAFPVLVRILAELKFINSELGRIALSSALVNDLLSCLLLVLSVNLAQRNTPSITLLPTFLASIGFIVFNIFVVRPLMLWMVRKTPEGETFSDFYMCIILAGVMLSGLITDAIGTHAVFGAFVFGLTIPHGPLGLSLVERLEDFITLLLLPLFFASTGLKTDLGLLDNFQEWATLVTLVILACVGKIIGTVIAALYYQISVRDGAVLGLLLNTKGVVEIIVINIGKDQKVLTSESFATLMLISVLMTAIIVPGMSLIYKPVRGVIPYKRRTIQLSQKESEFRVLVCIHTPRNVPTMINLLDATNPSKKSPICIYMVHLTELSGHASALILVQHHTSKDSDHPACNKTQAQSEHIVNAFRNYELQASNVSVQPSTVISPYSTMHEDVCNLAQEKRVAFIIVPFHKHQTVDGEMEPTNMSHRSVNINILSQAPCSVGILVDRGFNTSTHLGPDQQKSHNVAVLFFGGPDDREALSYAWRMSENPGVNLTLMRFVYAEEVLHQHSDHSPDESTVLTVNTDKDNQKKLDDRLISWFRTSRENDASVVYMEKMVNNGEQTVAAIRSMDDVHDLFIIGRGEEMKSPLIAGLTDWSECPELGAIGDLLASSDFAATASVLIVQQYLGEGMEEDILETDQDEQTLTP 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00842 818 PANTHER CATION/H + ANTIPORTER 18 797 - -
Viun3g00842 818 Pfam Sodium/hydrogen exchanger family 50 431 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Viun3g00842 818 Gene3D - 43 441 IPR038770 -
Viun3g00842 818 Gene3D - 485 758 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00842 Viun-Chr3 5146336 5148965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00842 17 808 Antiporter Super Family AT2G13620 59.596 0.0 956
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00842 K26731 - gmx:100779048 1102.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00842 3 5146336 5148965 Viun3g00842 3 5146336 5148965 ECH