Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00798 ATGCTTATATGTATGCAAGTTAATTCAGATTTTGAAATTTTAGTTTTAGACATCACTACCAAAGATTTTTCTGCTTCTTGTCCTACCATGAAAAGCCTCTGCCTTGGGCCGTTCCTTGCTGTTAGTGACCCAGTTAGTTCAAGAGCCTTTGGAGGCCATTTAACCAGAAAGTGCTTCCCCAAGCAAGTTCATTTCCACTCCCGTTCTGTTGTTTTCTCTTCTATCTTATGTTCTGCAACCCTATCAGTGTTGCCAGAATTAGAAGAGAAGCAGATATTTGATGGAGAGAAGGCTAATTTGCTTGTTAGAGATCTCAGAAATTGCTTTGATTCAGGCAGGACAAAGAGCTATGAATGGAGGGTTTCCCAGTTGGAGGCCATTTTTAAGCTGTTGAAAGAGAATGAGAAGGAAATCACTGAAGCTCTATATAAGGACCTTGCTAAACCTCAATTTGAAGCATTTGTATCTGAGGTTTCCCAGGTAAAATCCTCATGCAGTGAAGCACTTGAGGGGCTGAAAAACTGGATGAAGCCTGAGAGGGTGAGTACTTCAATCACAACATTTCCATCAACAGCAGAGATTGTGCCAGAACCGCTGGGGGTGGTGTTGGTTATCTCTACATGGAATTTTCCTTTCTTGTTATCAATGGATCCTGTTATTGGAGCCATTTGTGCGGGTAACACAGTGGTCCTTAAACCATCAGAAATTGCTCCAGCAACATCATCACTGCTTGCAAATTTGATCGAACAATATTTGGACAATTCTGCCATAAGAGTTGTTGAAGGGGCTGTTCCTGAAACAACTGCTCTCCTGGAGCAGAAGTGGGATAAGATACTTTATACAGGTAGTGCGAGAGTTGGTCGCATTGTCATGGCTGCAGCTGCAAAGCATCTTACACCAGTGATTCTGGAACTTGGAGGAAAGTGCCCTGCTGTTGTTGAATCAGATGTCAACTTACAAGTTACTGCTAGGAGGATAATAGCTGGCAAGTGGGGATGCAATAGTGGACAAGCATGCATTGCTGTTGATTATATCATCACAAGAAAAGAGTTTGCTCCAAAGCTGATAAGTGCCTTAAAAGAAGAATTGGAACAATTTTTTGGTAAAGATCCATTGGAATCAAAAGACATGTCACGGATTGTGTCTTCTAACCAGTTTGCACGGCTTGTGAAACTCTTGGATGAGGATAAGGTATCTGACAAGATTGTTTTAGGAGGTCAGAGGGATGAGAAGAAATTAAAAATTTCCCCAACTATCATATTAGATGTTCCTGAAGATGCTTTGGTAATGCAGGAGGAGATATTTGGGCCAATTTTGCCAATCATCACAGTGGACAACATAGAAGATTGCTACAGTATAATCAAATCAAGGCCAAAACCTCTTGCTGCATATCTCTTCACAAACAATGAGCAGCTGAAGAAGGATTATGTGGATAAGATATCATCAGGAGGGATACTCATCAATGACGCTATCCTCCATGTTGCAACTCGTGGTTTGCCTTTTGGAGGAGTTGAAGAGAGTGGAATGGGTTGTTACCATGGAAAATTCTCTTTTGATAGTTTCAGCCATAGAAAGTCAGTTCTCTATAGAAGTTTTGATGCAGATTCATCCATAAGATATCCTCCATACACAACTGAGAAGGAAAAATTATTGAAGGCCGTTATCAGTGGCAATATTGTTCAAATAATTCTTGCTCTTTTTGGATGGTCTTAA 1713 0.4075 MLICMQVNSDFEILVLDITTKDFSASCPTMKSLCLGPFLAVSDPVSSRAFGGHLTRKCFPKQVHFHSRSVVFSSILCSATLSVLPELEEKQIFDGEKANLLVRDLRNCFDSGRTKSYEWRVSQLEAIFKLLKENEKEITEALYKDLAKPQFEAFVSEVSQVKSSCSEALEGLKNWMKPERVSTSITTFPSTAEIVPEPLGVVLVISTWNFPFLLSMDPVIGAICAGNTVVLKPSEIAPATSSLLANLIEQYLDNSAIRVVEGAVPETTALLEQKWDKILYTGSARVGRIVMAAAAKHLTPVILELGGKCPAVVESDVNLQVTARRIIAGKWGCNSGQACIAVDYIITRKEFAPKLISALKEELEQFFGKDPLESKDMSRIVSSNQFARLVKLLDEDKVSDKIVLGGQRDEKKLKISPTIILDVPEDALVMQEEIFGPILPIITVDNIEDCYSIIKSRPKPLAAYLFTNNEQLKKDYVDKISSGGILINDAILHVATRGLPFGGVEESGMGCYHGKFSFDSFSHRKSVLYRSFDADSSIRYPPYTTEKEKLLKAVISGNIVQIILALFGWS 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00798 570 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 307 507 IPR016163 GO:0016620
Viun3g00798 570 FunFam Aldehyde dehydrogenase 307 507 - -
Viun3g00798 570 FunFam Aldehyde dehydrogenase 106 310 - -
Viun3g00798 570 SUPERFAMILY ALDH-like 101 543 IPR016161 GO:0016491
Viun3g00798 570 Pfam Aldehyde dehydrogenase family 99 527 IPR015590 GO:0016491
Viun3g00798 570 PANTHER ALDEHYDE DEHYDROGENASE 97 562 IPR012394 GO:0006081
Viun3g00798 570 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 106 525 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00798 Viun-Chr3 4935785 4941310 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00798 45 570 Aldehyde Dehydrogenase Gene Family AT4G34240 64.449 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00798 K00128 - gmx:100800699 953.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00798 3 4935785 4941310 Viun3g00798 3 4935785 4941310 ECH