Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00797 ATGAAAAGCCTCTGCCTTGGGCCGTTCCTTGCTGTTAGTGACCCAGTTAGTTCAAGAGCCTTTGGAGGCCATTTAACCAGAAAGTGCTTCCCCAAGCAAGTTCATTTCCACTCCCGTTCTGTTGTTTTCTCTTCTATCTTATGTTCTGCAACCCTATCAGTGTTGCCAGAATTAGAAGAGAAGCAGATATTTGATGGAGAGAAGGCTAATTTGCTTGTTAGAGATCTCAGAAATTGCTTTGATTCAGGCAGGACAAAGAGCTATGAATGGAGGGTTTCCCAGTTGGAGGCCATTTTTAAGCTGTTGAAAGAGAATGAGAAGGAAATCACTGAAGCTCTATATAAGGACCTTGCTAAACCTCAATTTGAAGCATTTGTATCTGAGGTTTCCCAGGTAAAATCCTCATGCAGTGAAGCACTTGAGGGGCTGAAAAACTGGATGAAGCCTGAGAGGGTGAGTACTTCAATCACAACATTTCCATCAACAGCAGAGATTGTGCCAGAACCGCTGGGGGTGGTGTTGGTTATCTCTACATGGAATTTTCCTTTCTTGTTATCAATGGATCCTGTTATTGGAGCCATTTGTGCGGGTAACACAGTGGTCCTTAAACCATCAGAAATTGCTCCAGCAACATCATCACTGCTTGCAAATTTGATCGAACAATATTTGGACAATTCTGCCATAAGAGTTGTTGAAGGGGCTGTTCCTGAAACAACTGCTCTCCTGGAGCAGAAGTGGGATAAGATACTTTATACAGGTAGTGCGAGAGTTGGTCGCATTGTCATGGCTGCAGCTGCAAAGCATCTTACACCAGTGATTCTGGAACTTGGAGGAAAGTGCCCTGCTGTTGTTGAATCAGATGTCAACTTACAAGTTACTGCTAGGAGGATAATAGCTGGCAAGTGGGGATGCAATAGTGGACAAGCATGCATTGCTGTTGATTATATCATCACAAGAAAAGAGTTTGCTCCAAAGCTGATAAGTGCCTTAAAAGAAGAATTGGAACAATTTTTTGGTAAAGATCCATTGGAATCAAAAGACATGTCACGGATTGTGTCTTCTAACCAGTTTGCACGGCTTGTGAAACTCTTGGATGAGGATAAGGTATCTGACAAGATTGTTTTAGGAGGTCAGAGGGATGAGAAGAAATTAAAAATTTCCCCAACTATCATATTAGATGTTCCTGAAGATGCTTTGGTAATGCAGGAGGAGATATTTGGGCCAATTTTGCCAATCATCACAGTGGACAACATAGAAGATTGCTACAGTATAATCAAATCAAGGCCAAAACCTCTTGCTGCATATCTCTTCACAAACAATGAGCAGCTGAAGAAGGATTATGTGGATAAGATATCATCAGGAGGGATACTCATCAATGACGCTATCCTCCATGTTGCAACTCGTGGTTTGCCTTTTGGAGGAGTTGAAGAGAGTGGAATGGGTTGTTACCATGGAAAATTCTCTTTTGATAGTTTCAGCCATAGAAAGTCAGTTCTCTATAGAAGTTTTGATGCAGATTCATCCATAAGATATCCTCCATACACAACTGAGAAGGAAAAATTATTGAAGGCCGTTATCAGTGGCAATATTGTTCAAATAATTCTTGCTCTTTTTGGATGGTCTTAA 1626 0.4133 MKSLCLGPFLAVSDPVSSRAFGGHLTRKCFPKQVHFHSRSVVFSSILCSATLSVLPELEEKQIFDGEKANLLVRDLRNCFDSGRTKSYEWRVSQLEAIFKLLKENEKEITEALYKDLAKPQFEAFVSEVSQVKSSCSEALEGLKNWMKPERVSTSITTFPSTAEIVPEPLGVVLVISTWNFPFLLSMDPVIGAICAGNTVVLKPSEIAPATSSLLANLIEQYLDNSAIRVVEGAVPETTALLEQKWDKILYTGSARVGRIVMAAAAKHLTPVILELGGKCPAVVESDVNLQVTARRIIAGKWGCNSGQACIAVDYIITRKEFAPKLISALKEELEQFFGKDPLESKDMSRIVSSNQFARLVKLLDEDKVSDKIVLGGQRDEKKLKISPTIILDVPEDALVMQEEIFGPILPIITVDNIEDCYSIIKSRPKPLAAYLFTNNEQLKKDYVDKISSGGILINDAILHVATRGLPFGGVEESGMGCYHGKFSFDSFSHRKSVLYRSFDADSSIRYPPYTTEKEKLLKAVISGNIVQIILALFGWS 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00797 541 Pfam Aldehyde dehydrogenase family 70 498 IPR015590 GO:0016491
Viun3g00797 541 SUPERFAMILY ALDH-like 72 514 IPR016161 GO:0016491
Viun3g00797 541 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 77 496 IPR016162 GO:0016491
Viun3g00797 541 FunFam Aldehyde dehydrogenase 278 478 - -
Viun3g00797 541 FunFam Aldehyde dehydrogenase 77 281 - -
Viun3g00797 541 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 278 478 IPR016163 GO:0016620
Viun3g00797 541 PIRSF ALDH 54 537 IPR012394 GO:0006081
Viun3g00797 541 PANTHER ALDEHYDE DEHYDROGENASE 68 533 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00797 Viun-Chr3 4935503 4941310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00797 16 541 Aldehyde Dehydrogenase Gene Family AT4G34240 64.449 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00797 K00128 - gmx:100800699 953.355