Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00795 ATGTCTGAGGTTCCTTGCGATTGCAACCGCACCACTGAAAATGGTGCTGAAACTGAAAGCTTTCACCAGTTTTTTGAGTGCTGGATTTCAGAGCAAAACCAGCATCTGAAGGAGCTTTTAGTTGCAGAATCAAGTCAGCTAACAGGTGAGGAACTTCAGGCACTGAGTGAAAAGGTGGTTGAGCATTATGAGTACTACTACAAGGCCAAGTCAAGGTGTGCAAAGCAAGATGTGTTGGCCATGTTGTCCCCACCATGGATGAGTTCCTTGGAAGAGGCTTTTCTATGGATTGGTGGATGGAGACCAAGCATGGCCTTTCACCTGCTATATTCCAAGTCTGGTTTGCAATTTGAGGCCAGGTTCAATGAACTGATCCAGGGTCTAAAAACACATGACTTGGGAGATCTTTCAGCATCCCAAATAGCTGAGCTTGATGAGATGCAAAGGAGGACGATCTCAGAGGAGAGGGAGATCACAGATTTGATGGCAAGTCACCAGGAGACTTTGGCTGATGCATCAATGGTGGAGTTGTCTCATGTTGCTTCTGAGATGATTAGAGGCAATGAAGGAGGAGAGGTTGAGGAGAGTAAAGTGATAGAAGAGAAGGTTGAATCAGCACTGGTTCCAAAGGAAAAGGGTTTGGAGAAAATCCTGCAGAAAGCTGATGAACTTAGGTTGGGAACAGTGAAGGGTATTGTTAATGTTCTGACTCCAAAACAGGCCATTCATTTCTTGATTGCTGCTGCAGAACTGCACCTGAGGTTACATGAGTGGGGAAAGAAGATAGATGCCAGAAAGGGAAATCTTGGTACTGCTGGTGAAGGTAAAAACTGTAATTCATCAATTTGA 849 0.4476 MSEVPCDCNRTTENGAETESFHQFFECWISEQNQHLKELLVAESSQLTGEELQALSEKVVEHYEYYYKAKSRCAKQDVLAMLSPPWMSSLEEAFLWIGGWRPSMAFHLLYSKSGLQFEARFNELIQGLKTHDLGDLSASQIAELDEMQRRTISEEREITDLMASHQETLADASMVELSHVASEMIRGNEGGEVEESKVIEEKVESALVPKEKGLEKILQKADELRLGTVKGIVNVLTPKQAIHFLIAAAELHLRLHEWGKKIDARKGNLGTAGEGKNCNSSI 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00795 282 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 19 271 - -
Viun3g00795 282 ProSiteProfiles DOG1 domain profile. 18 265 IPR025422 GO:0006351|GO:0043565
Viun3g00795 282 Pfam Seed dormancy control 35 111 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00795 Viun-Chr3 4918919 4920537 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00795 20 256 bZIP Transcription Factor Family AT5G06960 27.004 4.41e-19 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00795 - - gmx:100784399 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00795 3 4918919 4920537 Viun3g00795 3 4918919 4920537 ECH