Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00794 ATGTCTGAGGTTCCTTGCGATTGCAACCGCACCACTGAAAATGGTGCTGAAACTGAAAGCTTTCACCAGTTTTTTGAGTGCTGGATTTCAGAGCAAAACCAGCATCTGAAGGAGCTTTTAGTTGCAGAATCAAGTCAGCTAACAGGTGAGGAACTTCAGGCACTGAGTGAAAAGGTGGTTGAGCATTATGAGTACTACTACAAGGCCAAGTCAAGGTGTGCAAAGCAAGATGTGTTGGCCATGTTGTCCCCACCATGGATGAGTTCCTTGGAAGAGGCTTTTCTATGGATTGGTGGATGGAGACCAAGCATGGCCTTTCACCTGCTATATTCCAAGTCTGGTTTGCAATTTGAGGCCAGGTTCAATGAACTGATCCAGGGTCTAAAAACACATGACTTGGGAGATCTTTCAGCATCCCAAATAGCTGAGCTTGATGAGATGCAAAGGAGGACGATCTCAGAGGAGAGGGAGATCACAGATTTGATGGCAAGTCACCAGGAGACTTTGGCTGATGCATCAATGGTGGAGTTGTCTCATGTTGCTTCTGAGATGATTAGAGGCAATGAAGGAGGAGAGGTTGAGGAGAGTAAAGTGATAGAAGAGAAGGTTGAATCAGCACTGGTTCCAAAGGAAAAGGGTTTGGAGAAAATCCTGCAGAAAGCTGATGAACTTAGGTTGGGAACAGTGAAGGGTATTGTTAATGTTCTGACTCCAAAACAGGCCATTCATTTCTTGATTGCTGCTGCAGAACTGCACCTGAGGTTACATGAGTGGGGAAAGAAGATAGATGCCAGAAAGGGAAATCTTGGTACTGCTGGTGAAGTAAGTAACTCACAAGTTGAAAAAAGCAAAGAGGATGTGATAAGGATAGCTTTCTTTTTGGTAGGGTGA 891 0.4467 MSEVPCDCNRTTENGAETESFHQFFECWISEQNQHLKELLVAESSQLTGEELQALSEKVVEHYEYYYKAKSRCAKQDVLAMLSPPWMSSLEEAFLWIGGWRPSMAFHLLYSKSGLQFEARFNELIQGLKTHDLGDLSASQIAELDEMQRRTISEEREITDLMASHQETLADASMVELSHVASEMIRGNEGGEVEESKVIEEKVESALVPKEKGLEKILQKADELRLGTVKGIVNVLTPKQAIHFLIAAAELHLRLHEWGKKIDARKGNLGTAGEVSNSQVEKSKEDVIRIAFFLVG 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00794 296 ProSiteProfiles DOG1 domain profile. 18 265 IPR025422 GO:0006351|GO:0043565
Viun3g00794 296 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 19 270 - -
Viun3g00794 296 Pfam Seed dormancy control 35 111 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00794 Viun-Chr3 4918915 4920537 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00794 20 256 bZIP Transcription Factor Family AT5G06960 27.004 5.81e-19 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00794 - - gmx:100784399 422.165