Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00791 ATGTCGCTCATTGCGTTAGCTGCACCTGTCTCTCCCACTGTCGTCGCTTTTCGCCGCGGAGCGAAGCAATGGAGCGCGCTATTTCCGAAAACCAGGGGAACTGGTTCGTCCTTGTTCGCAAACTCTCTCAGGAAACGGTTGCGATTGCGGTTTTTCGCTTCGGGAAATAGTGGTGGCATTGCGGAGGAGATATCTGAAGCCGAGAAAGAGCCTAAGAATTTTGCGTGGCCTGATAACAAGAAACCTAGAGTGTGCATATTAGGCGGTGGATTTGGTGGCTTATATACTGCTTTGAGGTTGGAATCGTTGGAGTGGCCTGATGATAACAAGCCACAGATTATACTTGTCGACCAATCTGAACGTTTTGTTTTCAAGCCAATGTTGTATGAGCTTCTATCTGGAGAAGTGGATGAATGGGAAATAGCTCCTCGTTTCTTAGATTTGCTGGCAAACACTAGTGTGCAGTTTTTCAAAGACAGAGTAAAAGTTTTGCATCCCTCTGATCATTGGGGAATGAATGTATCCAAAGCATCTAGATGTGGAGGAACTGTTCATCTTGAAAGCGGCCTTCAGATTGAATATGACTGGCTGGTTCTTGCATTAGGCGCTGAAGCCAAACTGGATGTTGTACCAGGGGCAGAGGAATTTGCAATTCCTTTCTCAACACTAGAAGATGCACGTAAAGTCAATGATAAATTAACTACATTAGAGAGAAAGACATTTGGAAAGGACGTTCAAATTAGTGTGGCTGTTGTTGGTTGTGGTTACTCGGGAGTTGAATTGGCTGCAACACTAGCAGAGCGATTACGGAACAGAGGGATTGTGAAAGCAATTAATGTTGAAACTGTGATTTGCCCAAATGCCCCACCAGCAAACAGGGAAGCTGCTCTAAAAGTTCTTTCATCAAGGAAAGTTGAACTTTTATTGGGTTACTTTGTCCGCTGTATTCGGAAGCTCAGTGGATTGGAATCTTCAGATACCTTGACAGGGGTGGATGAAAATAGTACTGAAGTAGCATCTGCTACTGAGAAGTATATATTGGAGCTACAGCCTGCTGAAAGGGGAATGCAGAGTCAAATCATCGAAGCAGACCTGGTATTATGGACTGTTGGAACCAAACCTCCTCTTCCTAAGCTAGAACCTTCAGATGCACCATTTATAATTCCACTAAATGCTAGAGGGCAAGCTGAAACAGATGAAACACTACGTGTTAAGGGTCATCCCCGGATATTTGCCCTCGGCGACTCTTCTGCATTGAGGGATTCAAGCGGAAGGATCCTTCCAGCCACTGCACAGGTTGCATTTCAGCAAGCAGACTTCACTGGTTGGAATCTGTGGGCTGCAATCAATGGGCGTCCGCTTTTGCCATTTAGGTTTCAGAATCTGGGTGAGATGATGACCCTGGGAAGAAATGATGCTGTCATTTCTCCGAGTTTTATTGATGGATTGACATTAGAAGGACCTGTTGGTCATACTGCGAGGAAGATAGCTTATTTGATCCGGTTACCAACAGATGAACATAGGCTTAAAGTGGGGATTAGCTGGCTTACAAAATCTGCCATTGATTCGGTGTCATCGCTGCAAAGTACCTTGTACAAGGTCCTTTCGGGCTCTTAG 1617 0.4508 MSLIALAAPVSPTVVAFRRGAKQWSALFPKTRGTGSSLFANSLRKRLRLRFFASGNSGGIAEEISEAEKEPKNFAWPDNKKPRVCILGGGFGGLYTALRLESLEWPDDNKPQIILVDQSERFVFKPMLYELLSGEVDEWEIAPRFLDLLANTSVQFFKDRVKVLHPSDHWGMNVSKASRCGGTVHLESGLQIEYDWLVLALGAEAKLDVVPGAEEFAIPFSTLEDARKVNDKLTTLERKTFGKDVQISVAVVGCGYSGVELAATLAERLRNRGIVKAINVETVICPNAPPANREAALKVLSSRKVELLLGYFVRCIRKLSGLESSDTLTGVDENSTEVASATEKYILELQPAERGMQSQIIEADLVLWTVGTKPPLPKLEPSDAPFIIPLNARGQAETDETLRVKGHPRIFALGDSSALRDSSGRILPATAQVAFQQADFTGWNLWAAINGRPLLPFRFQNLGEMMTLGRNDAVISPSFIDGLTLEGPVGHTARKIAYLIRLPTDEHRLKVGISWLTKSAIDSVSSLQSTLYKVLSGS 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00791 538 SUPERFAMILY FAD/NAD(P)-binding domain 82 460 IPR036188 -
Viun3g00791 538 PRINTS Pyridine nucleotide disulphide reductase class-I signature 410 417 - -
Viun3g00791 538 PRINTS Pyridine nucleotide disulphide reductase class-I signature 248 273 - -
Viun3g00791 538 PRINTS Pyridine nucleotide disulphide reductase class-I signature 83 105 - -
Viun3g00791 538 PANTHER APOPTOSIS-INDUCING FACTOR 1 21 534 - -
Viun3g00791 538 FunFam Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial 79 511 - -
Viun3g00791 538 Pfam Pyridine nucleotide-disulphide oxidoreductase 83 438 IPR023753 GO:0016491
Viun3g00791 538 Gene3D - 79 511 - -
Viun3g00791 538 PRINTS FAD-dependent pyridine nucleotide reductase signature 194 212 - -
Viun3g00791 538 PRINTS FAD-dependent pyridine nucleotide reductase signature 363 379 - -
Viun3g00791 538 PRINTS FAD-dependent pyridine nucleotide reductase signature 84 103 - -
Viun3g00791 538 PRINTS FAD-dependent pyridine nucleotide reductase signature 248 266 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00791 80 439 Chloroplast and Mitochondria Gene Families AT4G21490 23.181 9.93e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00791 K17872 - gmx:100795521 966.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00791 3 4891894 4898164 Viun3g00791 3 4891894 4898164 ECH