Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00778 ATGGGTTTCCTCTCCGAACAAGAACTGAAGAAGATGAAGGTGAAGAAGGGTTGGCTTGCGGTTGAGGTAGAAGAAGAATCGGAAGAGGGTGGTTGTGGCGAAGGCTCTCACAGATTTATGATTCCAATTTCTTATCTTTATCATCCTCTCTTCAAGAACCTTCTGGATAAGGCGTACGAGGTTTACGGGTACCACACCCAAGGTCCTCTCAAGCTCCCGTGTTCAGTTGATGACTTTCTTCATCTCCGATGGAGAATCCACAAAGAAGCCACCACCACCCACCATCTTCATCATCACCAACCTCATCATCGTCAACTTTCTCACTCCTTCTCTTTCACCTCTTGTTGA 348 0.4655 MGFLSEQELKKMKVKKGWLAVEVEEESEEGGCGEGSHRFMIPISYLYHPLFKNLLDKAYEVYGYHTQGPLKLPCSVDDFLHLRWRIHKEATTTHHLHHHQPHHRQLSHSFSFTSC 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00778 115 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 10 82 IPR003676 GO:0009733
Viun3g00778 115 Pfam Auxin responsive protein 11 85 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00778 Viun-Chr3 4827577 4828266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00778 14 82 Calmodulin-binding Proteins AT3G43120 44.928 3.03e-11 55.5