Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00677 ATGGCAAAACAGCAAAACCAGGGAAAAGGCCAAGAGAGGGAATTGGAACTCGAAAGTGACGATTCTGAGACTGAGATTGAGGCCCCATTGCCTCTAACTGTGACTTCTCGGGCTTTGTATATGTTGGGAGATATCACTGCAGGGCCTGCGTTTAAGTTCACGCAATGGCTCCAATTGGTTCGTAAGCGAACTGCAAAACATCGTCCTTCTGGCTTCCCTCACCGCAATTCAATCAGAATGTCGTCTAATTCTTGCGTTATAGAACCATTGGAGGTTGTGGAGGATCCAAAACTGGAGCTGCAACCTGATCAGACAGAAATTAGATTGTGGGAGAGGCTTGGGAAGGCTGCAATGTTGGACATTGAGTCGAGCACTTTTTCTTGGGACATGCTCTCTTCACTGCACCACACTGAACACGGTAGTAGCAATGAACAATCCGAAGATGAGATGAACAAAGCTCTCGAGGTAACTGTAAATTCTGGAGGAGTTGTCTTCTTTGCCTTTTTCAATCTCCCTGGGAATGCTGATATTTGTCCAAAAGAAGCTGCAGCAGTTATAAAGATATCACCATCAAGAATGGCAACACAGTCTGAACGCCTTGGCTACGAATTTGCCAAGTGGTTGGGAGTCCAAACTCCACAGGGTAGAGTCATTCACAATACCAGTCTTGAATGGCAACAAATAAAGGAAGCTGGAGAAAGAGCTAGAGAAGCAGCAAATTCTGAGGGTGATGAAATTGGCGAGGTGACATGTTTTGAACTTTTGGAAGCACTCGAGCTAAGCCGGTGTCTCTTCTTTATGAGTTATGTACACGGTTCACCATTGCTTGAAAGCTCTACTGCATTCAACTCAAAGGAATCTGCAGAAAGAACATCAGAAGGTCTTGGGAGGGTGCTGATGCTGGACCTTGTGATCAGAAATGAAGATAGGTTGCCTTGCCGTGAGCTTAGATGGCGTGGAAATCCAGCGAATTTGTTGTTGGCTGGAAAGACTATATGTGCAAATACAGATATGCTAGAAGCCGCTGTTGATTCTGCAATTGACCGATATAGACCAAAGATGATATCGGCTTTTCAGAAAGAAAGAAGGTCAACTTCAGTAGATTGCAGACTCGATTCTCACGATCCTGGTTTCATATCACATTCCCCTGATCTTTCAGATATCTCAGAATCTCCAATATCTCCTCACATCAAACTTGTAACTCAAACATCCGAAGAATCACTCTCTCCAGACATCAACATAGTAGCCATTGATTCTGGTGTTCCTCGGCGACCACCTGCTGGAAAACGTGCAAATGATCAGGTGAATTACCCCAAGTTGATTGAGTTGTTACTCAACAGTTCTGAATTTGCCTCAAACCTGATATTTGATGTAACTGGAGGGAAACTAGGATGTCCTCCATCAGAAGACACGGACAAAACTGATGTATCTACGAACGACGTAATGTTTGTTGTTCATGCGTTCCGCGCTGGTTTCCGCGCTGCTCTCAGGGATCTGCAGGGATTTCACATATTCCTACTCACACTTCACCAAAGACTTGATACTTTGTTACGATCATTTATGAACATTATGAGCAAAATATCTTTGGGAGAATTTGACAAAGAAGATGCTGTAGTTCCTGACTCACCTTCAGTAGCAGTTGGTGGGCAATTTTGCTCGCCATCATGTAAAGAGAGGGTTGGTAATGACAACCATCATGATTTGGTTGATTCGGAATCACAGAAAACTGCTTCAAAGGCATCACCTTCAGGAAACAGAGATTGCACTGACTTTACTCCTACCCCAAAAGAATCTTGCCATGGAAAGTTCTATAAAGGAAATGGGGAACCACTACGTAGTCTCCGTTTGACTACTAAGCTCCGTGACTTCCATAAATTTGCCAAGGTTGATGCTGAATCCAGTAGAGAATTGGAACAATGGAATGAAATGCTTAAAAGCGATGCCATCAAACTATGCCAGGATAACAATTTCAATCCAGGATTTTTTGAGGGTAGTGATAATAACTGTGTTGTTGACGCATATGAACTTAAGATAAGACTTGAGCATATTCTTGAGAGAATTGCATTGATATCAGATGCTGCAAGTACTGAGAAACCTTCAGCAGTGACAAGTAGTCTGTTCATTGGTGGAGCATTGGCTGCAAGATCTGTTTACACACTACAATACTTGGGAATCACAAATATTTTGTGTTTGTGTACCAATGAAATTGGACAGTCAGAAACTCAGTATCCTGATCTATTTGAGTATAAGAATTTCTCTGTATGTGACAGTGATGATTACAACATCAGCGGCATATTTGAAGAAGCATGTGATTTGATAGATCATGTTGAAGAAAGAGGTCAAAAAGTTTTAGTTCACTGCTTTGAGGGGAAAAGCCGAAGTGTAACATTGGTCCTGGCATACTTAATGCTCAGGAAGAAGAATACTTTATCAGAAGCATGGCAAGCTTTGAAGCGAGTTCACTGTCGAGCACAACCCAATGACGGTTTTGCAAAGATCTTATTGGACTTGGATCAGAAACTACATGGAAAGGTTTCGATGGAATGGCATCAGCGAAAACCATTGATGAAAATTTGCCCAATATGTGGGAAGAATGCTGGACTAAGCAGTAGCTCACTTAAGCTCCATCTGCAGAAATCACACAGAAAGCTGTCCTCTGGGAGTGTAGATAGCGCCATGACCATGGAAATCGAGAAAGCTTTGACAGCTTTGAAGATTAACCGTGGAGGGAGTGTCAGCCCCACACAAAGACAATCTCATCCAATAATAGATCAATAG 2778 0.4266 MAKQQNQGKGQERELELESDDSETEIEAPLPLTVTSRALYMLGDITAGPAFKFTQWLQLVRKRTAKHRPSGFPHRNSIRMSSNSCVIEPLEVVEDPKLELQPDQTEIRLWERLGKAAMLDIESSTFSWDMLSSLHHTEHGSSNEQSEDEMNKALEVTVNSGGVVFFAFFNLPGNADICPKEAAAVIKISPSRMATQSERLGYEFAKWLGVQTPQGRVIHNTSLEWQQIKEAGERAREAANSEGDEIGEVTCFELLEALELSRCLFFMSYVHGSPLLESSTAFNSKESAERTSEGLGRVLMLDLVIRNEDRLPCRELRWRGNPANLLLAGKTICANTDMLEAAVDSAIDRYRPKMISAFQKERRSTSVDCRLDSHDPGFISHSPDLSDISESPISPHIKLVTQTSEESLSPDINIVAIDSGVPRRPPAGKRANDQVNYPKLIELLLNSSEFASNLIFDVTGGKLGCPPSEDTDKTDVSTNDVMFVVHAFRAGFRAALRDLQGFHIFLLTLHQRLDTLLRSFMNIMSKISLGEFDKEDAVVPDSPSVAVGGQFCSPSCKERVGNDNHHDLVDSESQKTASKASPSGNRDCTDFTPTPKESCHGKFYKGNGEPLRSLRLTTKLRDFHKFAKVDAESSRELEQWNEMLKSDAIKLCQDNNFNPGFFEGSDNNCVVDAYELKIRLEHILERIALISDAASTEKPSAVTSSLFIGGALAARSVYTLQYLGITNILCLCTNEIGQSETQYPDLFEYKNFSVCDSDDYNISGIFEEACDLIDHVEERGQKVLVHCFEGKSRSVTLVLAYLMLRKKNTLSEAWQALKRVHCRAQPNDGFAKILLDLDQKLHGKVSMEWHQRKPLMKICPICGKNAGLSSSSLKLHLQKSHRKLSSGSVDSAMTMEIEKALTALKINRGGSVSPTQRQSHPIIDQ 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00677 925 SMART dsp_5 698 840 IPR020422 GO:0006470|GO:0008138
Viun3g00677 925 Gene3D Protein tyrosine phosphatase superfamily 681 853 IPR029021 -
Viun3g00677 925 MobiDBLite consensus disorder prediction 574 592 - -
Viun3g00677 925 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 767 819 IPR000387 GO:0016311|GO:0016791
Viun3g00677 925 Pfam Actin-fragmin kinase, catalytic 106 363 IPR015275 -
Viun3g00677 925 Gene3D - 273 375 IPR036940 -
Viun3g00677 925 ProSiteProfiles Dual specificity protein phosphatase domain profile. 698 843 IPR020422 GO:0006470|GO:0008138
Viun3g00677 925 SUPERFAMILY Protein kinase-like (PK-like) 55 434 IPR011009 -
Viun3g00677 925 MobiDBLite consensus disorder prediction 1 26 - -
Viun3g00677 925 CDD DSP 699 836 - -
Viun3g00677 925 FunFam Dual specificity protein phosphatase PHS1 670 844 - -
Viun3g00677 925 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 698 843 IPR029021 -
Viun3g00677 925 Pfam Dual specificity phosphatase, catalytic domain 719 838 IPR000340 GO:0008138|GO:0016311
Viun3g00677 925 MobiDBLite consensus disorder prediction 563 593 - -
Viun3g00677 925 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 19 924 IPR035010 GO:0004721|GO:0009737|GO:0043622
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00677 Viun-Chr3 4159466 4164617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00677 6 921 Protein tyrosine phosphatase (PTP) family AT5G23720 61.663 0.0 1088
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00677 K14165 - gmx:100791993 1566.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00677 3 4159466 4164617 Viun3g00677 3 4159466 4164617 ECH