Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00674 ATGGCTCCCTCAGACCAATCTCGCCACTCTCTTGTTCCTGGATTCTTATACTCATCAAAAACACTGTCCCATTTGAGTAATAACACCAATCATGGGTTACCATTGCTACCATCATCATCATCATCGTTGCCAGCGCAAAATGGGGCCAAGAATCCTGTGATCCTTTCACCAAAAGAGAAAATCCGCATGTTTTCTCCTGCTTACTATGGAGCATGCAGTGCCGGCGGGGTCTTCAGTTGTGGACTCACCCACATGGCTGTCACTCCTCTCGATCTTGTCAAGTGCAACATGCAGATTGATCCCGTAAAGTACAAGAACATCACATCAGGATTTGGAGTGTTACTGAAGGAGCAGGGTGCTAAAGGTTTCTTCAGGGGATGGGTGCCTACTCTGCTGGGGTACAGTGCTCAAGGAGCATGCAAGTTTGGGTTTTATGAGTTCTTCAAGAAGTATTACTCAGACCTTGCAGGAGCCGAGAATGCAGTGAAGTACAAAACGATCATATATCTAGCTGGTTCTGCTTCAGCTGAAGTTATTGCTGATATTGCCCTTTGCCCTATGGAGGCTGTCAAAGTTCGTGTACAAACTCAGCCTGGCTTTGCTCGAGGTTTGTCTGATGGGTTGCCCAAGTTTATCAAGGCTGAGGGTTTTTCTGGGTTGTATAAAGGTATAGTTCCTCTTTGGGGCCGTCAAATTCCATACACGATGATGAAATTTGCTTCCTTTGAGACGGTTGTGGAGATGATTTACAAAAACGTGATCCCAATCCCGAAGGAGAAGTGCAGCAAAAATAAGCAGCTTGGAGTGAGTTTTGCAGCTGGGTACATAGCAGGTGTGCTGTGTGCAGTTGTCTCACATCCTGCCGACAACCTCGTTTCTTTTCTCAACAATGCCAAGGGAGCCACGATTGGTGATGCTGTGAAGAAGATTGGGGTGGTTGGTCTTTTCACTCGTGGCCTTCCTCTTCGTATAGTTATGATCGGAACACTAACCGGAGCACAGTGGGGACTCTATGATTCGTTTAAAGTATTCGTAGGACTGCCTACTACTGGAGGAAGTGCTCCTGCACCGGTTAAGTAG 1080 0.4676 MAPSDQSRHSLVPGFLYSSKTLSHLSNNTNHGLPLLPSSSSSLPAQNGAKNPVILSPKEKIRMFSPAYYGACSAGGVFSCGLTHMAVTPLDLVKCNMQIDPVKYKNITSGFGVLLKEQGAKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDLAGAENAVKYKTIIYLAGSASAEVIADIALCPMEAVKVRVQTQPGFARGLSDGLPKFIKAEGFSGLYKGIVPLWGRQIPYTMMKFASFETVVEMIYKNVIPIPKEKCSKNKQLGVSFAAGYIAGVLCAVVSHPADNLVSFLNNAKGATIGDAVKKIGVVGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVFVGLPTTGGSAPAPVK 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00674 359 ProSiteProfiles Solute carrier (Solcar) repeat profile. 67 151 IPR018108 -
Viun3g00674 359 ProSiteProfiles Solute carrier (Solcar) repeat profile. 164 248 IPR018108 -
Viun3g00674 359 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 47 355 IPR044677 GO:0005315|GO:1990547
Viun3g00674 359 FunFam Phosphate carrier protein, mitochondrial 67 345 - -
Viun3g00674 359 SUPERFAMILY Mitochondrial carrier 72 339 IPR023395 -
Viun3g00674 359 ProSiteProfiles Solute carrier (Solcar) repeat profile. 265 344 IPR018108 -
Viun3g00674 359 Gene3D Mitochondrial carrier domain 70 345 IPR023395 -
Viun3g00674 359 Pfam Mitochondrial carrier protein 169 252 IPR018108 -
Viun3g00674 359 Pfam Mitochondrial carrier protein 73 153 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00674 Viun-Chr3 4143402 4145561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00674 5 357 Chloroplast and Mitochondria Gene Families AT5G14040 74.247 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00674 K15102 - gmx:100800530 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00674 3 4143402 4145561 Viun3g00674 3 4143402 4145561 ECH