Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00670 ATGGAGGATGGCCGTCAGAATGAAAATGACAGACATAAAATTGAATACTACAGAGGACCACATTCCATGTGGAATACTGATTCCCAGCATCAAGTGAAAGAGCCAAATGCACTGGTTATGAATAAGAAGATTAGGTCCATTATGGCTGAAAGGCAGGCTGCTATTCTAGAGCTTGAACTGGAGGCTGCAATATCTGAAAAGAATGAAGCCTTGGCTGCTCGAGATGCAGCCATTCGACAGAGGGATGAAGCACTTGTTCAAAGAGATAATGCCATTTTGGAACGGGATAATGCCCTTGCAGCCCTTCAGAGTCGGAACAGTTCTGTCAACTTCCCATTTGGCAGTGGAATCCAATGTGGATCAAAACGAATGCATCATTCTTCAAACCATCTGTCTATCATGTCTGAAACTGTGTACAAAACAAATGATGCCTCCCCGATTAAAGTTATACCTTCTGAAGTTGTCAAATCTCATCAAACAAAGAGAACAAAGGAGAACAAGGTCACTGGTTCTAAGACATCAAACCCACCCTACAAAGTAAAGAAAATGGGTGAGGACTTAAACAGGAAGGCTTCTTTTGAAGGTACAAAAATCCGATCTGAATGGCATAGGCAAGATATTGGCCTGAATTTGGTTACATTTGATGAAACTACCATGCCAGTTCCAGTTTGCACATGTACCGGCATACCACGACAGTGCTACAAATGGGGCAATGGTGGATGGCAGTCATCTTGTTGTACCACAACATTGTCTATGCATCCGTTACCACAGCTTCCAAACAAACGTCATGCTCGCATTGGAGGACGAAAGATGAGTGGAAGTGTTTTTACCAGACTTCTCAGCAGGTTGGTGTTAGAAGGCCATGATTTATCTATACCACTAGATCTTAAGGAATATTGGGCCAGACATGGAACCAATCGCTATATCACTATCAAGTAA 939 0.426 MEDGRQNENDRHKIEYYRGPHSMWNTDSQHQVKEPNALVMNKKIRSIMAERQAAILELELEAAISEKNEALAARDAAIRQRDEALVQRDNAILERDNALAALQSRNSSVNFPFGSGIQCGSKRMHHSSNHLSIMSETVYKTNDASPIKVIPSEVVKSHQTKRTKENKVTGSKTSNPPYKVKKMGEDLNRKASFEGTKIRSEWHRQDIGLNLVTFDETTMPVPVCTCTGIPRQCYKWGNGGWQSSCCTTTLSMHPLPQLPNKRHARIGGRKMSGSVFTRLLSRLVLEGHDLSIPLDLKEYWARHGTNRYITIK 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00670 312 PANTHER - 22 312 IPR010409 -
Viun3g00670 312 MobiDBLite consensus disorder prediction 156 181 - -
Viun3g00670 312 SMART GAGA_bind_2 1 312 IPR010409 -
Viun3g00670 312 Pfam GAGA binding protein-like family 13 312 IPR010409 -
Viun3g00670 312 Coils Coil 53 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00670 Viun-Chr3 4102074 4106022 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00670 1 312 BBR or BPC Transcription factor family AT2G21240 58.991 3.43e-124 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Viun3g00670 GAGA_bind 4.9e-95 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00670 - - gmx:100813103 543.502