Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00646 ATGAAAATGGAGTTTGTGAAGAAGTGGAAGAGAGTATTGGGGAGAAGCAAGAGATTGTATCCGGAGAACAACTTAAGTGGAAGCTATGGCAGATTGAGGAACAAAGAAAGGCAACAACGTAGGAAGAATAATTCGAAGGCTTGTGTGGCTCCACAAGGTTGTCTTTGTGTCTACGTTGGAGCCGAGAGAGAGAGATTCGTGATCAAGATCGAGATAGCGAACCACCCTTTGTTCAAAGAGCTTTTGGATGGTGCTGAGAGAGAATATGGGTATAGAAACGATGGTCCCTTGTGCCTCCCTTGCCACGTTGACTTCTTCTGTGAGGCGCTGACGGAGATGGAAATCGGCACCACCGTCGAAGAGGGTGTTATGGGTTCTCATGGTTACAGTCACCACAACTCGTGTTCAGTTTCTAATCTCAGTTATGCGACAGGGTCTTTCTCTGATCGTTATTATGAAAACCTTGTGAATTGA 474 0.4557 MKMEFVKKWKRVLGRSKRLYPENNLSGSYGRLRNKERQQRRKNNSKACVAPQGCLCVYVGAERERFVIKIEIANHPLFKELLDGAEREYGYRNDGPLCLPCHVDFFCEALTEMEIGTTVEEGVMGSHGYSHHNSCSVSNLSYATGSFSDRYYENLVN 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00646 157 Pfam Auxin responsive protein 7 110 IPR003676 GO:0009733
Viun3g00646 157 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 41 108 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00646 Viun-Chr3 3964687 3965482 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00646 22 106 Calmodulin-binding Proteins AT4G34750 39.560 2.72e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00646 K14488 - gmx:102667331 150.214