Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00573 ATGGCGAAAAGATCTCCTACTCGGGTTAACCAAACGTACGAAACAGGTTGTACGTGGCGAATGCTTAGAATCTTTAATTTTCGTGAAGGTCGTTCAGACAGAAGATTGGTTTCCAGTAGGAGGCATTTGAATGCTCATGCTAATGAAAATGGAAAATCCAGAAGTAGCTCAGGTGCGGCCTGCACAGTTGATGAGAAGTGCCTTCAAATTGGTGTGAGTTCCAGAAGAAGAGATTACATCTGTAGAAGTATCAACAGCATGGTGAATGATGAGGTAGCAGATTGGGAAAATGAAGTAACAAAGATGATTGTTGATCACAGATTTGTCAACACACATTATCAAGGCAAAGATGGAGCAGGCTTTCAGCCTAATCAATTCCTGGATGCTTTAAAGATTTTATATTCAAACAAGGAACTTTTCATTAAGCTTCTGCAAGATCCAAACTCTTTGTTAGTAAAACAGATTCAGGAATTTCAGAGTTCTCAAGTGAAAGAACCATGCCAGCATGCAAGGCAGAAAATGATGAGTAGATTAAATAATCCTCAAAATAGTAATGCTACACAGTGTGTAAAACCTTTTAATTCCTCTGATAGATCTGATTCGAGGTCAAACAGAATAGTAGTTTTGAAGCCTGGCACTGTTAATGTGGAAAATTCTGTAGAAACAAGCTTTGTTAGCCCTCCACATTCGCCTAGTAGCTTCAGTTCTAATGCACAAAATACCAGGCTTTCACATTTTTCCTTCAGTTGTATAAAGAGAAAATTGAAGCATGTTATGAAAGTAAGGAGACAAGAACAACAGTTGAGGACAACTGATGGAATACCAAGTAGACTTTCCTCCAGTTCAAAGGGCCTGAGAGATGGTAAAAAAGTAAAAGAATTGGAAATTTCTGAAAAAAACTCACCAATTCGTGCCCTTAGTAATACTGGAAAATGGTTGAATTCATATCATGATTTGAAGAAGAGGGAGAACATTATCATGTTCAAGGATTCTGAGTTATGTATGGGGCAGGAAGCAGCTTCTTTTGGTGAAGAAAATATATTGAAAATGCACATTGAAAGTAGGAAGAGTCGGTCTCAGATGTTGAACTGTGGAATTGAGGAAACTTTTGAAGAAGACATTAGTCTTAAAAATAGTGTTCTTAGCCGCAATCTGCATGCATATTATGATATTCCTAGAGATGGCAGATGCATGACTCAGAACATCGACATGAATAATATAATCGGAGGATGTGGATCTTTGCTGGATTTGCGTCCAGAGATCCAGACATTGTCTTTTTCATCAGATGTTTCATCAAGCCAATCCTGTCAGAGGACAGATAATACTGTAAACATGGGGAGCAAAGTTGAACACCCTAATAATGAATTTTTCGATGAACATTTTACTAAGGATGACGTTACCAACCTTCCAACCACAATCATTCAACCAGATGAGTCACCAGAAAAGAGAATGCATGAAAAAATTGAAGAGAACAATTTTGAAGACCTTTTAATAAGACTCTCTTTTGATCCAATGAACGATTTAGCCTCCTCCAAGGACATCATAAGGGAAATTCTGCATGCTTTCAACCTGAAACTGGATGAACTTTCTGGTGGCACAATCTTGCATGACTGTGTCATCGAATCTTTCATGCAGGTATACCAGAATAGTGGTTTCCCACTTCACGTTGGAAACGTTCAAGCATATATTGTGAAGAAACTTGTGGTTAAAGAGATTACTGAACTCGTTAACTTGCATTTTCACCGTCATCCATCACCTTTAACGTTAGAACAGCTTGTTGAAAAGGACTTGGCAAGACGTGGTTCATGGCTAAACATCCAAGTTGATGCAGAAGATATTGCAGTAGAGCTGGAGAATGATGTTCTTGAAAAACTGGTAGTGGAAATTGCGTCTGAGATGAATTACCATAAACCTATCTGTACTTAA 1926 0.3821 MAKRSPTRVNQTYETGCTWRMLRIFNFREGRSDRRLVSSRRHLNAHANENGKSRSSSGAACTVDEKCLQIGVSSRRRDYICRSINSMVNDEVADWENEVTKMIVDHRFVNTHYQGKDGAGFQPNQFLDALKILYSNKELFIKLLQDPNSLLVKQIQEFQSSQVKEPCQHARQKMMSRLNNPQNSNATQCVKPFNSSDRSDSRSNRIVVLKPGTVNVENSVETSFVSPPHSPSSFSSNAQNTRLSHFSFSCIKRKLKHVMKVRRQEQQLRTTDGIPSRLSSSSKGLRDGKKVKELEISEKNSPIRALSNTGKWLNSYHDLKKRENIIMFKDSELCMGQEAASFGEENILKMHIESRKSRSQMLNCGIEETFEEDISLKNSVLSRNLHAYYDIPRDGRCMTQNIDMNNIIGGCGSLLDLRPEIQTLSFSSDVSSSQSCQRTDNTVNMGSKVEHPNNEFFDEHFTKDDVTNLPTTIIQPDESPEKRMHEKIEENNFEDLLIRLSFDPMNDLASSKDIIREILHAFNLKLDELSGGTILHDCVIESFMQVYQNSGFPLHVGNVQAYIVKKLVVKEITELVNLHFHRHPSPLTLEQLVEKDLARRGSWLNIQVDAEDIAVELENDVLEKLVVEIASEMNYHKPICT 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00573 641 Pfam Domain of unknown function (DUF4378) 534 628 IPR025486 -
Viun3g00573 641 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 87 - -
Viun3g00573 641 MobiDBLite consensus disorder prediction 263 289 - -
Viun3g00573 641 MobiDBLite consensus disorder prediction 179 203 - -
Viun3g00573 641 Pfam Protein of unknown function (DUF3741) 106 149 IPR022212 -
Viun3g00573 641 MobiDBLite consensus disorder prediction 268 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00573 Viun-Chr3 3533475 3537325 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00573 114 166 TRM (TON1 Recruiting Motif) Superfamily AT1G63670 52.830 8.27e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00573 - - vra:106768413 1077