Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00572 ATGGCGAAAAGATCTCCTACTCGGGTTAACCAAACGTACGAAACAGGTTGTACGTGGCGAATGCTTAGAATCTTTAATTTTCGTGAAGGTCGTTCAGACAGAAGATTGGTTTCCAGTAGGAGGCATTTGAATGCTCATGCTAATGCTGCAGAAAATGGAAAATCCAGAAGTAGCTCAGGTGCGGCCTGCACAGTTGATGAGAAGTGCCTTCAAATTGGTGTGAGTTCCAGAAGAAGAGATTACATCTGTAGAAGTATCAACAGCATGGTGAATGATGAGGTAGCAGATTGGGAAAATGAAGTAACAAAGATGATTGTTGATCACAGATTTGTCAACACACATTATCAAGGCAAAGATGGAGCAGGCTTTCAGCCTAATCAATTCCTGGATGCTTTAAAGATTTTATATTCAAACAAGGAACTTTTCATTAAGCTTCTGCAAGATCCAAACTCTTTGTTAGTAAAACAGATTCAGGAATTTCAGAGTTCTCAAGTGAAAGAACCATGCCAGCATGCAAGGCAGAAAATGATGAGTAGATTAAATAATCCTCAAAATAGTAATGCTACACAGTGTGTAAAACCTTTTAATTCCTCTGATAGATCTGATTCGAGGTCAAACAGAATAGTAGTTTTGAAGCCTGGCACTGTTAATGTGGAAAATTCTGTAGAAACAAGCTTTGTTAGCCCTCCACATTCGCCTAGTAGCTTCAGTTCTAATGCACAAAATACCAGGCTTTCACATTTTTCCTTCAGTTGTATAAAGAGAAAATTGAAGCATGTTATGAAAGTAAGGAGACAAGAACAACAGTTGAGGACAACTGATGGAATACCAAGTAGACTTTCCTCCAGTTCAAAGGGCCTGAGAGATGGTAAAAAAGTAAAAGAATTGGAAATTTCTGAAAAAAACTCACCAATTCGTGCCCTTAGTAATACTGGAAAATGGTTGAATTCATATCATGATTTGAAGAAGAGGGAGAACATTATCATGTTCAAGGATTCTGAGTTATGTATGGGGCAGGAAGCAGCTTCTTTTGGTGAAGAAAATATATTGAAAATGCACATTGAAAGTAGGAAGAGTCGGTCTCAGATGTTGAACTGTGGAATTGAGGAAACTTTTGAAGAAGACATTAGTCTTAAAAATAGTGTTCTTAGCCGCAATCTGCATGCATATTATGATATTCCTAGAGATGGCAGATGCATGACTCAGAACATCGACATGAATAATATAATCGGAGGATGTGGATCTTTGCTGGATTTGCGTCCAGAGATCCAGACATTGTCTTTTTCATCAGATGTTTCATCAAGCCAATCCTGTCAGAGGACAGATAATACTGTAAACATGGGGAGCAAAGTTGAACACCCTAATAATGAATTTTTCGATGAACATTTTACTAAGGATGACGTTACCAACCTTCCAACCACAATCATTCAACCAGATGAGTCACCAGAAAAGAGAATGCATGAAAAAATTGAAGAGAACAATTTTGAAGACCTTTTAATAAGACTCTCTTTTGATCCAATGAACGATTTAGCCTCCTCCAAGGACATCATAAGGGAAATTCTGCATGCTTTCAACCTGAAACTGGATGAACTTTCTGGTGGCACAATCTTGCATGACTGTGTCATCGAATCTTTCATGCAGGTATACCAGAATAGTGGTTTCCCACTTCACGTTGGAAACGTTCAAGCATATATTGTGAAGAAACTTGTGGTTAAAGAGATTACTGAACTCGTTAACTTGCATTTTCACCGTCATCCATCACCTTTAACGTTAGAACAGCTTGTTGAAAAGGACTTGGCAAGACGTGGTTCATGGCTAAACATCCAAGTTGATGCAGAAGATATTGCAGTAGAGCTGGAGAATGATGTTCTTGAAAAACTGGTAGTGGAAATTGCGTCTGAGATGAATTACCATAAACCTATCTGTACTTAA 1932 0.383 MAKRSPTRVNQTYETGCTWRMLRIFNFREGRSDRRLVSSRRHLNAHANAAENGKSRSSSGAACTVDEKCLQIGVSSRRRDYICRSINSMVNDEVADWENEVTKMIVDHRFVNTHYQGKDGAGFQPNQFLDALKILYSNKELFIKLLQDPNSLLVKQIQEFQSSQVKEPCQHARQKMMSRLNNPQNSNATQCVKPFNSSDRSDSRSNRIVVLKPGTVNVENSVETSFVSPPHSPSSFSSNAQNTRLSHFSFSCIKRKLKHVMKVRRQEQQLRTTDGIPSRLSSSSKGLRDGKKVKELEISEKNSPIRALSNTGKWLNSYHDLKKRENIIMFKDSELCMGQEAASFGEENILKMHIESRKSRSQMLNCGIEETFEEDISLKNSVLSRNLHAYYDIPRDGRCMTQNIDMNNIIGGCGSLLDLRPEIQTLSFSSDVSSSQSCQRTDNTVNMGSKVEHPNNEFFDEHFTKDDVTNLPTTIIQPDESPEKRMHEKIEENNFEDLLIRLSFDPMNDLASSKDIIREILHAFNLKLDELSGGTILHDCVIESFMQVYQNSGFPLHVGNVQAYIVKKLVVKEITELVNLHFHRHPSPLTLEQLVEKDLARRGSWLNIQVDAEDIAVELENDVLEKLVVEIASEMNYHKPICT 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00572 643 Pfam Domain of unknown function (DUF4378) 536 630 IPR025486 -
Viun3g00572 643 Pfam Protein of unknown function (DUF3741) 108 151 IPR022212 -
Viun3g00572 643 MobiDBLite consensus disorder prediction 265 291 - -
Viun3g00572 643 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 90 - -
Viun3g00572 643 MobiDBLite consensus disorder prediction 181 205 - -
Viun3g00572 643 MobiDBLite consensus disorder prediction 270 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00572 Viun-Chr3 3533469 3537327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00572 116 168 TRM (TON1 Recruiting Motif) Superfamily AT1G63670 52.830 8.03e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00572 - - vra:106768413 1085.09