Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00568 ATGCGGTCGTGGTGGGGAAAGTCTTCTTCCAAAGAGGTGAAAAGGAAGGAAAACAGGGAAAGTATTATTCACACCATACAGCGGAAATTAAAGAATGCTTCTGAAGAGAAATGCAATAATAAATCTGTAAGATCAAGGAGATATCGTGATGATGCCATCTCCAAAAAGGGTTCTAGATCTCTTGCACCTTCAAGATCACCATCACCCTCTACACATGTATCCCGATGTCAAAGTTTTGCAGAGAGGCCTCTCTCTCAACCACTCCCATTACCAGGGTCACTCCCATTACCAGGGTCACATCTTTCGGATGCCATTGCTGCAAATTCTGGGGTTATTTTAACATCAAAACTTGATAGAGCCATAAACTCAAAGCCATCTCTATATTTTCCCCTTCCAATACCTGGTTTTGTTTCAAACAAGGAAGACGCTACTGATATGGAAGGAGAAATAGCCACTGCATCTGTTTCTAGTGAAAGCTCAATTGATAGTGGCAACTCATTTGATTCGCCGCATTTTGTTAGTCCTCTGGCTTCTGATTATGAAAATGGAAACCGAGCCACCATTAATAGTTCTTTTAGTCTGGTGCGCAAGAACCAACCTCTTATTACTATCCAAAGAAACTCAAGAACATTCTCAAAAACAAGTCCTAAGTTGTGCAATAATAAGCCACTGTCTACCTCACCAAGAGGGGTTCCATTACACCTGCAAAATCTGCAAGTGGCTCGCCCAGGTGGTTTGCGTAGTGCTCCAGGTAGTTCAGTATCAAGTCCCAGAAATCCAATGGGAGCATTTGGTCCTGAACAAATGTTGAATTCTGAATTACAGACAACAAAACCTTATCCAGATATAGCTTCTGGTCACTCCTATAGTCTGGTTTCAGGCCGTAACTCTAATCATATTTCAGTTGGTGGGGATCTTTTGGGACAGATGATTTTGCCTCAAAACAGGTGTAGCCCTGAGTGTTCTCCAATAGTTAGTCCCAGAATGAGAAGCCCTGGTCCCAGTTCTAGGATACAGAGTGGTACTGTGACCCCTCTGCATCCTAAAGCTGGAGGAACTGCAGCAGAAGCACATACAAGACGCCTTGACGATGTGAAACAAAAAAATCATCAGTTACCACTTCCTCCAATAACAGTTACTAAGCCGTGTCCATTTTCTCCAACCTATTCTGCATCAACAACACCTTCAGCCCCTCGTAGTCCTGCCGGATCAGAAACTGCGATAAGCCCAGGTTCGCGCTGGAAAAAAGGGCAGTTGCTTGGAAGGGGAACATTTGGACATGTATATCTTGGTTTTAACAGAGAAAGTGGTGAGATGTGTGCGATGAAGGAGGTAACCCTTTTTTCAGATGATGCTAAATCAAGGGAAAGTGCACAGCAGCTTGGCCAAGAAATTGCAATGCTTAGTCGGTTGCGGCATCCAAATATTGTTCAGTATTATGGATCTGAGACGATCGATGACAGACTTTATGTATACTTGGAGTATGTCTCCGGTGGGTCAATCTATAAGCTGGTTAAAGAATATGGCCAGTTAGGTGAAATTGCAATTCGCAATTATACTCGACAAATTTTGTTAGGACTCGCATATTTACACGCGAAGAACACTGTTCACAGGGACATTAAAGGAGCAAACATATTGGTGGACCCTAATGGGCGGATAAAATTGGCAGATTTTGGGATGGCAAAGCATATAAGTGGGCCATCTTGTCCATTTTCTTTCAAAGGAAGTCCTTACTGGATGGCACCTGAGGTTATAAAAAATTCAAATGGTTGTAATCTTGCGGTTGATATATGGAGTCTGGGATGCACCGTTTTGGAGATGGCGACAACAAAACCTCCTTGGAGCCAATATGAAGGGGTTGCTGCTATGTTTAAGATTGGGAACAGCAAGGAACTTCCGACAATTCCAGATCATCTTTCAGAAGATGGAAAAGATTTTGTAAGGCTTTGTTTGCAAAGGAATCCTCAAAATCGTCCCTCGGCTGCTCAACTTCTAGAGCATTCATTTGTTAAAAATGCTATGTTGGAAAGATCTATTTTATCTGCCGCTCCTTCAGAAGATCCTACTGCTATAATAAATGCAGTGAGATCTCTGGTCATTGGACCAGCAAAACGTAATTCATGCTTAGACTCAGAAGTAGCCGGGATCAATCCGCCTAGAAACTTGAAAGCTGGTTCTGGATCAAGTGATCCTCATGCACCAAGAGAGATCTCTTGTCCCATCTCTCCCTCTTTTCCTTATAAATCATTGCATACAAGTGGAAGGATGTCGCCTCCAATATCTAGCCCTCATACTGCATCAGGCTCATCTTCGCCCCTAACCAGTGGCGGCGGTGCTATTCCATATCATCAGACAAAGCAATCAATAATCTCCCATGAAGTTTCGGGTATGATACAAAAGTCCCATCAGGGTGCTATTCCAATATCTAGCCCTCGTACTGCATCTGGCTCATCTTCGCCCCTAACCAGTGGCGGCGGTGCTATTCCATATCATCAGACAAAGCAATCAATGCTCTCTCATGAAGTTTCGGGTATGATCCAAAAGTCCCATCATGGTGTTATTCCAATATCTAGCCCTCGTACTGCGTCTGGCTCATCTTCACCACTAACCAGTGGCGGTGGTGCAATTCCATTTCATCAGTCAAAGCAACAACTATTCTCACATGAAGTTGTGGGTATGATCCAAAAGTCTCAGAATGGTGCCATTCCAATGTCTAGCTCTCGTACTGCATCTGGCTCTTCTTCACCACTAACCAGCGGTGGAGGCGCTGTTCCATTTCATCAGACAAAGCAACCACTATTCTCACACGAAGTTTTGAGTAGGATCCAAAAGTCTCAGAATGGTGGTGGTGCTCCAATATCTGGCCCTCGTACTGCATCTGGCACATATTCGCCACTAACCAGCGGTGGTGGTGCTATTCCATTTCATCAGATAAAGCAGCCACTATTCTCACATGAAGTTTCCGGTATGATTCAAAGGTCTCAGAATGGGTCTATTCCAATATCTAGCCCTCCTACTCCATCTGGCTCATCTTCGCCACTAACCTGTGGGGGAGGAGCTATTCCGTTTCATCAGACAAAGCAGCCACCGTTCTCACATGAAGTTGTGGGTATGACTCAAAGGTCTCAGACTCGTACCGCGTCTGGCTCATCTTCGCCTCTGACCAGTGGCGGCGGTGCTATTCCATTTCATCAGACAAAGCCACAACTATTCTCAAATGAACTCGTGGGTATGATCCAAAGGTCTCTGGATGGTCCTATTCCCACAGCTAGCAATCGTACTGCATGTGGCTCATCTTCGCCACTGACCAGTGGTGGCAGTGCTATTCCATGTCTTCAGACAAAGCAATCACAAATATCACATGAAGTTGTTGGTATGGTACAAAATCCTCAGCATGGTTTTTATTCATTTGGAAATACCCCTCCTCATCAGGGTTCTGAGTATGCGCAGTTTGGGAGAAACTTGCAAACTACACATGCTTACCGGGATGTAGGTTCATCTGACAGTAACCGTTCTAGGAGGGTTGTCCAGGGAGACCCAATTGAATTTCGCGATGGGAAATCATATTTGGCTGATTGCGTGTCACAACAGCTGTTGAGGGATTATGTACGGCTACATGCATGCCTTGATCTTAAATCCGATGCCCCAAATCCTGATCGCACAAATGGCTTATGA 3675 0.4446 MRSWWGKSSSKEVKRKENRESIIHTIQRKLKNASEEKCNNKSVRSRRYRDDAISKKGSRSLAPSRSPSPSTHVSRCQSFAERPLSQPLPLPGSLPLPGSHLSDAIAANSGVILTSKLDRAINSKPSLYFPLPIPGFVSNKEDATDMEGEIATASVSSESSIDSGNSFDSPHFVSPLASDYENGNRATINSSFSLVRKNQPLITIQRNSRTFSKTSPKLCNNKPLSTSPRGVPLHLQNLQVARPGGLRSAPGSSVSSPRNPMGAFGPEQMLNSELQTTKPYPDIASGHSYSLVSGRNSNHISVGGDLLGQMILPQNRCSPECSPIVSPRMRSPGPSSRIQSGTVTPLHPKAGGTAAEAHTRRLDDVKQKNHQLPLPPITVTKPCPFSPTYSASTTPSAPRSPAGSETAISPGSRWKKGQLLGRGTFGHVYLGFNRESGEMCAMKEVTLFSDDAKSRESAQQLGQEIAMLSRLRHPNIVQYYGSETIDDRLYVYLEYVSGGSIYKLVKEYGQLGEIAIRNYTRQILLGLAYLHAKNTVHRDIKGANILVDPNGRIKLADFGMAKHISGPSCPFSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDHLSEDGKDFVRLCLQRNPQNRPSAAQLLEHSFVKNAMLERSILSAAPSEDPTAIINAVRSLVIGPAKRNSCLDSEVAGINPPRNLKAGSGSSDPHAPREISCPISPSFPYKSLHTSGRMSPPISSPHTASGSSSPLTSGGGAIPYHQTKQSIISHEVSGMIQKSHQGAIPISSPRTASGSSSPLTSGGGAIPYHQTKQSMLSHEVSGMIQKSHHGVIPISSPRTASGSSSPLTSGGGAIPFHQSKQQLFSHEVVGMIQKSQNGAIPMSSSRTASGSSSPLTSGGGAVPFHQTKQPLFSHEVLSRIQKSQNGGGAPISGPRTASGTYSPLTSGGGAIPFHQIKQPLFSHEVSGMIQRSQNGSIPISSPPTPSGSSSPLTCGGGAIPFHQTKQPPFSHEVVGMTQRSQTRTASGSSSPLTSGGGAIPFHQTKPQLFSNELVGMIQRSLDGPIPTASNRTACGSSSPLTSGGSAIPCLQTKQSQISHEVVGMVQNPQHGFYSFGNTPPHQGSEYAQFGRNLQTTHAYRDVGSSDSNRSRRVVQGDPIEFRDGKSYLADCVSQQLLRDYVRLHACLDLKSDAPNPDRTNGL 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00568 1224 MobiDBLite consensus disorder prediction 1 20 - -
Viun3g00568 1224 MobiDBLite consensus disorder prediction 28 56 - -
Viun3g00568 1224 MobiDBLite consensus disorder prediction 797 830 - -
Viun3g00568 1224 MobiDBLite consensus disorder prediction 59 73 - -
Viun3g00568 1224 MobiDBLite consensus disorder prediction 993 1028 - -
Viun3g00568 1224 MobiDBLite consensus disorder prediction 899 927 - -
Viun3g00568 1224 FunFam Mitogen-activated protein kinase kinase kinase 412 694 - -
Viun3g00568 1224 MobiDBLite consensus disorder prediction 354 368 - -
Viun3g00568 1224 MobiDBLite consensus disorder prediction 711 781 - -
Viun3g00568 1224 MobiDBLite consensus disorder prediction 854 877 - -
Viun3g00568 1224 MobiDBLite consensus disorder prediction 326 413 - -
Viun3g00568 1224 MobiDBLite consensus disorder prediction 28 73 - -
Viun3g00568 1224 MobiDBLite consensus disorder prediction 745 781 - -
Viun3g00568 1224 SMART serkin_6 414 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g00568 1224 ProSitePatterns Protein kinases ATP-binding region signature. 420 443 IPR017441 GO:0005524
Viun3g00568 1224 CDD STKc_MEKK1_plant 413 670 - -
Viun3g00568 1224 MobiDBLite consensus disorder prediction 899 925 - -
Viun3g00568 1224 MobiDBLite consensus disorder prediction 993 1015 - -
Viun3g00568 1224 MobiDBLite consensus disorder prediction 943 964 - -
Viun3g00568 1224 MobiDBLite consensus disorder prediction 383 407 - -
Viun3g00568 1224 Pfam Protein kinase domain 415 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g00568 1224 Gene3D Transferase(Phosphotransferase) domain 1 412 693 - -
Viun3g00568 1224 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 58 692 - -
Viun3g00568 1224 MobiDBLite consensus disorder prediction 212 231 - -
Viun3g00568 1224 SUPERFAMILY Protein kinase-like (PK-like) 412 671 IPR011009 -
Viun3g00568 1224 ProSiteProfiles Protein kinase domain profile. 414 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00568 Viun-Chr3 3502421 3511066 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00568 4 793 MAP Kinase Kinase Kinase AT1G63700 60.745 0.0 861
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Viun3g00568 Pkinase 2e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00568 K20717 - gmx:100814422 1462.97