Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00545 ATGGCAGCGACAACTACAACAACTTTCCTCAAACTTCAAAACCAGCCCACCAAGCCCAAACGACGCAAGTATCGAGAAACGACAATCTCCGCTGCGGCATCTCCAAACCACACCCAAACAATCCCTCACCGTCGCACTCCTCAATCCCCTATATGTTCCCAAACCCCATCACAACCCGAACCCGAACCCGAACCACCTGCATTGCCCGAATCTCCCTCCACCCACAGGATCCGCTTCTCGCCGGGGCGCTTCTCCCCGATAATGGACTTCACCCACTCCTCCCCCACCGCCAACGGCCACCACCCCTCCCAGCCGCAGGCCCACGACTTCCCTTCCAGCTTCTCCAAGTTTAACTCCGCCCTCACCGCGGGCCTTTTGAACCCAATGTCCCCCCCGCCCGACAAGACCCGATCCAGCCCCACGCTCTTCGAGATGATGGCCAGCGAGCCCGATGTCCACCACAGGCCCACCACCCACATCCCGCCCACCACCGTCACCGCCGCCGCTGCGTCGTCGCTGCACAAACCCCAAATTCTCGATCGCCACGCCCTCATGATGCAGCGGATTTCGGACCTCTTGGGGTCCCGCAGCCCCGGGAACCAGTTCAACGATGCCGCTTCCAGCGATATCAAGCTCACGCTCAGCTCCAAAGATGGAATCAGTGTCTCCATGAACGTGCATCGCCAAATCCTCGTCGCGCATAGTAGGTTCTTCTCGGTGAAGCTCTCCGATCGCTGGACCAAGCAGCAGCAGCAGCGCTCGCCGGTTCCCTACGAAGTTGAAATCGCCGATTGCGACGATGTGGAGGTTTACATCGAGACCTTGAGGTTGATGTATTGTAAGGATCTTAGGAAGAAGCTCATGAGGGAGGATGTCTCCAGAGTTCTCGGTATCCTAAAGGTTTCAGCTGCCATTGGGTTTGATGCTGGGGTTTTGTCTTGTTTGGAGTACTTGGAAGCGGCACCTTGGGCCGAGGATGAGGAAGAGAAGGTGGCATCGCTCCTTTCTGAGCTTCGTCTTGAAGCGGTTGGCGCAGGGGAGGTTTTGAAGAGGGTTTCAACTGATGCTGCTACCAATGGAAATGAAGAGGGGAGTGATAATGAGGAGGTTCTTCTTAAGCTTATCCGTGTGGTTCTTGAAGGCAAGGATGAGAAGGCCAGGCGTGAGATGAAAGGGTTAGTGTCGAAGATGCTGCATGAAAATTCTTCTCAGAATGATCTTCGGAAGGAGTCGCTGTACTTAGCATGTGATGATTGTCTGCAGTTACTTCGTCACCACTTTTTGCAGGCTGCGGGTTCGGACTTGCAGGATGTGAGTCAAATTGCAAGACAAGCAGACAATTTGCATTGGATTTTGGATATTTTAGTTGACAGACAGATTGCCGAGGATTTCCTGAAAACATGGGCCTCTCAGGCAGATTTGGCTGAAGCTCATTCTAAGGTGCCAGCAGTTCACAGGTTTGAGGTTAGCAGAGTTACAGCAAGGTTGTTTGTTGGGATTGGGAAAGGACAGTTGTTGGCTTCTAAAGATGTTAGATGTTTGCTTCTAAAAACATGGTTGGTGCCCTTTTATGATGACTTTGGTTGGATGAGGAGGGCATCGAAGGGGCTTGATAGGCACCTAATTGAGGATGGTCTCAGTAACACGATTCTTACTCTGCCACTCTCCTGGCAACAGGATATTTTGCTTGCTTGGTTTGATCGTTTCTTGAATTCCGGCGAAGATTGCCCAAATATTCAAAGAGGATTTGAAGTTTGGTGGAGAAGGGCTTTCTGGAAGAGGAATGGAGAGCAAGAACGGACAAGACAACTACGAATTACAACTACATCAGCTGAGAACCCTTGA 1845 0.5214 MAATTTTTFLKLQNQPTKPKRRKYRETTISAAASPNHTQTIPHRRTPQSPICSQTPSQPEPEPEPPALPESPSTHRIRFSPGRFSPIMDFTHSSPTANGHHPSQPQAHDFPSSFSKFNSALTAGLLNPMSPPPDKTRSSPTLFEMMASEPDVHHRPTTHIPPTTVTAAAASSLHKPQILDRHALMMQRISDLLGSRSPGNQFNDAASSDIKLTLSSKDGISVSMNVHRQILVAHSRFFSVKLSDRWTKQQQQRSPVPYEVEIADCDDVEVYIETLRLMYCKDLRKKLMREDVSRVLGILKVSAAIGFDAGVLSCLEYLEAAPWAEDEEEKVASLLSELRLEAVGAGEVLKRVSTDAATNGNEEGSDNEEVLLKLIRVVLEGKDEKARREMKGLVSKMLHENSSQNDLRKESLYLACDDCLQLLRHHFLQAAGSDLQDVSQIARQADNLHWILDILVDRQIAEDFLKTWASQADLAEAHSKVPAVHRFEVSRVTARLFVGIGKGQLLASKDVRCLLLKTWLVPFYDDFGWMRRASKGLDRHLIEDGLSNTILTLPLSWQQDILLAWFDRFLNSGEDCPNIQRGFEVWWRRAFWKRNGEQERTRQLRITTTSAENP 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00545 614 MobiDBLite consensus disorder prediction 1 15 - -
Viun3g00545 614 Pfam BTB/POZ domain 201 296 IPR000210 GO:0005515
Viun3g00545 614 Gene3D Potassium Channel Kv1.1; Chain A 189 321 IPR011333 -
Viun3g00545 614 MobiDBLite consensus disorder prediction 87 110 - -
Viun3g00545 614 MobiDBLite consensus disorder prediction 54 70 - -
Viun3g00545 614 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 191 600 IPR038920 -
Viun3g00545 614 MobiDBLite consensus disorder prediction 29 53 - -
Viun3g00545 614 ProSiteProfiles BTB domain profile. 208 287 IPR000210 GO:0005515
Viun3g00545 614 MobiDBLite consensus disorder prediction 1 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00545 Viun-Chr3 3329789 3333999 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Viun3g00545 BTB 0.00025 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00545 - - ccaj:109800730 1024.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00545 3 3329789 3333999 Viun3g00545 3 3329789 3333999 ECH
Viun3g00545 3 3329789 3333999 Viun9g01790 9 27461328 27464090 PCT