Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00509 ATGAGTTCAGATGCGATTAGTGAACGAAGTGCATCAGCCGTGGTAGAACGGAAGTTTCAATATAGACAACTTTTATTTTTGGCATACCAAAGTTTAGGCTTTTTGTTTGGTGACTTGAGCTTATCGCCTCTTTATGTCTATCAAAGTATATTTTCCGGAAGACTGAAACATGTCCAGAATGAGGATGCAATATTTGGCGCATTTTCTCTGATCTTTTGGACTCTTTTAATTATTTCTTTGTTGAAGTATGCACTTATTATGTTAAGTGCAGATGATAATGGCGAAGGTGGAGTTGTTGCTTTGTACTCACAGCTTTGCAGAAGTGCAAAATTATGTTTGCTTCCTAATCATCAAGCTTCCGATGAGGAGCTTTCTACGTATCGCAAGCCTGGCTCCTCAAATGGAAGTATACCTTCCTCGCCTTTGAAAAGATTCATTGAGAAACACAAGAATACAAAGATGGCTTTGCTTATTTTTGTTTTACTAGGTGCTTGCATGGCAATTTGTGTTGGTGCACTCATGCCTGCCATTTCTGTTCTTTCATCCGTTGAAGGCCTGAAAATTGAAGCAAAGATTACAAATAAAAGTATGGTGTCTTGTATTTCTTGTGTTCTACTGATTGGACTCTTTGTCATGCAACATCGTGGCTCCTACAAGGTTGCGTTCGTGTTTCCTCCTGTAATCATCCTATGGCTACTGACTATTTTCATGATTGGCATTTACAATATCATCAAATGGAACCCAAAAGTATATCAGGCTCTTTCTCCATATTATGTATACAAGTTCTTTATGCTTACAGGAAAAGATGGTTGGACTAACCTTGGAGGAGTATTTCTATGCGTTACAGGAACTGAAGCTATGTTTGCAGACCTTGGTTACTACAGACAAACACCTGTAAGGGTTGCATTTTATTGTATCATTTACCCATGTCTAGTTCTTCAATACATGGGGCAGGCGGCCTTCCTTTCCAAGAATTTATCTGCAGTACCTATAAGCTTTTATGCTTCTATTCCAGATGTTCTCTTTTGGCCAGTATTTGTGGTGTCTGCTTTGGCGGTTATAGTTGCAAGTCAGGCTGTCATTGCTTCAACATTCTCTGTAGTCCAACAATGTCATGCATTTGAATGTTTCCCTCGGGTTAAGGCAGTACATTCCAGAAGGTGGATCCCTGGCCAGACATATATACCAGAGATAAACTGGATTCTTATGATAATCAGCTTGGCTGTGACATTTGGTTTAGGAGACAAGAACCGTATAGGATATGCTTATGGGATTGCATATCTAATTCTGTTGTTTGTGACCACATGTTTGACATCACTAGTCATCATCCTTGTATGGCATCAAAGTCCTATAATTGCTCTGGCATTTGCTCTGTTCTTTGGTTCGATAGAGATTATTTTCCTGTCATCCTATTGTACGAAAATCCCCAAAGGTGGCTGGATTCCACTTGTGCTTTCGGCGGTCTTCATGGTTGTTATGTATGTGTGGCATTATGGTTCTAGGAAAAAGTATCTACTTGACATGCATGACAAAATTTCGATGAGGTCCATCCTTGGATTAGGTCCTAGTCTTGGGATTGTTAGAGTTCCTGGAATGGGCCTTATCTACACTGAATTAGCTACTGGAGTCCCTGCCAGTTTTTCTCATTTCTTGACAAATCTGCCAGCATTCTACCAAGTGGTTGTTTTTGTTTGTGTGAAGACTGTACCAGTGCCTTGTGTGCCGCATGAAGAACGTTACCTGATTGGCCGAATTGGTCCCAAATCTTTCCGAATGTATCGTTGTATTGTTCGAAATGGCTATAAAGATGTGTATAGTCACGAAAATGATTTTGAAAATGACCTAGTGATGAGCATAGCTGAATTCATTCAATTGGAAGCAGAAGGTTCCTCTGGAAATGCAGAGGGTTCAGTGGATGGACGGATGGCAGTGGTTAGGACATCGGGGAAATTTGGGACACGATTGCTTATGTCCGAATCTTCTGCTTTTGAGGAACGCAACAATACTAATCTTCCTGGAGCTTTGACTCTTACTAGCAGTAAATCCCCGACATTGAAGAGGCTGCAGGCGATGTATGAGCAGGAGTCACCTGAGCTCAACACTGGACGACGAATTCGATTTGAGTTGCAAAATGTAATATATAAAGACCCACGCGTTAAGGAAGAACTCATGGAACTTGTAGAAGCCAAGCGCACTGGAGCAGCGTATGTAATAGGTCATTCTCACGTAAAGGCCAAGTGGAACTCAACATTTATAAAGAAGTTTGCCATCAACCTCTACTCTTTTCTGCGGAAAAATTGTCGGTCTCCTGCAGTGGGTCTAAACATTCCTCAGATTTCTCTGATTAAGGTTGGAATGAATTACCATGTGTAG 2373 0.4088 MSSDAISERSASAVVERKFQYRQLLFLAYQSLGFLFGDLSLSPLYVYQSIFSGRLKHVQNEDAIFGAFSLIFWTLLIISLLKYALIMLSADDNGEGGVVALYSQLCRSAKLCLLPNHQASDEELSTYRKPGSSNGSIPSSPLKRFIEKHKNTKMALLIFVLLGACMAICVGALMPAISVLSSVEGLKIEAKITNKSMVSCISCVLLIGLFVMQHRGSYKVAFVFPPVIILWLLTIFMIGIYNIIKWNPKVYQALSPYYVYKFFMLTGKDGWTNLGGVFLCVTGTEAMFADLGYYRQTPVRVAFYCIIYPCLVLQYMGQAAFLSKNLSAVPISFYASIPDVLFWPVFVVSALAVIVASQAVIASTFSVVQQCHAFECFPRVKAVHSRRWIPGQTYIPEINWILMIISLAVTFGLGDKNRIGYAYGIAYLILLFVTTCLTSLVIILVWHQSPIIALAFALFFGSIEIIFLSSYCTKIPKGGWIPLVLSAVFMVVMYVWHYGSRKKYLLDMHDKISMRSILGLGPSLGIVRVPGMGLIYTELATGVPASFSHFLTNLPAFYQVVVFVCVKTVPVPCVPHEERYLIGRIGPKSFRMYRCIVRNGYKDVYSHENDFENDLVMSIAEFIQLEAEGSSGNAEGSVDGRMAVVRTSGKFGTRLLMSESSAFEERNNTNLPGALTLTSSKSPTLKRLQAMYEQESPELNTGRRIRFELQNVIYKDPRVKEELMELVEAKRTGAAYVIGHSHVKAKWNSTFIKKFAINLYSFLRKNCRSPAVGLNIPQISLIKVGMNYHV 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00509 790 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 20 789 IPR003855 GO:0015079|GO:0016020|GO:0071805
Viun3g00509 790 Pfam K+ potassium transporter 29 603 IPR003855 GO:0015079|GO:0016020|GO:0071805
Viun3g00509 790 NCBIfam potassium uptake protein 27 790 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00509 Viun-Chr3 2996223 3004810 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00509 14 790 Inorganic Solute Cotransporters AT4G23640 60.153 0.0 972
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00509 K03549 - gmx:100777998 1382.85