Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00482 ATGGAGAGTGAATGGAGCTGGGAACAAAACACACTCATCAATGAGCTAGTTCAAGGAATGGAGCTAGCAAGGAAGTTGAAGGAAGACTTGAGAATGCCGTACTCAGTTGACTCAAAAGATATGCTGCTGCAGAGGATACTATCTTCTTATGAAAAGGCTCTACTCATTCTGAGATGCAATGCATCAACTTCCGAGTTGCAGGCCACGAGTCAAGCAACAGCAACTTTGTTGCCGGAGTCCCCAATATCCGTCCATGGAAGTCCTCTGAGTGAGGATCTTGATGGGGCCGTCAAGGATCACCAAGAAATTAAACATGATTCAAAGAAAAGAAAGATAACGCCCAAATGGATGGATCATGTAAGAGTGAGCTGCGAGAGTGGTCTTGAAGGACCGCAAGAAGATGGCTACAACTGGAGAAAATATGGTCAAAAAGACATCCTCGGAGCCAAATATCCCAGAAGTTACTATAGGTGCACCTTCCGCAACACACAGGGTTGTTGGGCCACGAAGCAAGTGCAGAGATCAGATGAAGATCCCACAATATTTGACATAACCTACCGAGGAAAACATACCTGTTCTCAAGGAAACAACGCCGTTTTGCCACCTAAGTCACCAGACAAACAAGAGAAGACACACAGTCATAACATTGACATTCACCATGCACAGGCATCACAAGAAAACCTTACAAAGTTCAGAAACATCTTGTCTGTCAACACAGACAAACTAGACAATGGAGATATGGCATATCCTTTCACTTTCCCTTCGACTTCATCAGGATGCACGAAACAATACAACCACAGCTTGATTCCTTTGACCCTAGAGAATGAGTATTTCTTGAGCGATCAATACCAAACGCACCTGTTATCTCCAACAACACCAGAATCAAACTATCTCCCATCCCCAACTTTCCAGATGAATGAGTTTGGTGCAATCTACAACAAGCCTTATTCAGACTCAGATATTAATGAGATCATTTCCACCAACACATCAGCAACCAATTCTCCAATTCCCGATTTCAATTTCTCACTTGATCCAGTGGAAATTGACCCCAATTTCCCTTTCAACACCCCAGGATTTTTCTCCTGA 1086 0.4346 MESEWSWEQNTLINELVQGMELARKLKEDLRMPYSVDSKDMLLQRILSSYEKALLILRCNASTSELQATSQATATLLPESPISVHGSPLSEDLDGAVKDHQEIKHDSKKRKITPKWMDHVRVSCESGLEGPQEDGYNWRKYGQKDILGAKYPRSYYRCTFRNTQGCWATKQVQRSDEDPTIFDITYRGKHTCSQGNNAVLPPKSPDKQEKTHSHNIDIHHAQASQENLTKFRNILSVNTDKLDNGDMAYPFTFPSTSSGCTKQYNHSLIPLTLENEYFLSDQYQTHLLSPTTPESNYLPSPTFQMNEFGAIYNKPYSDSDINEIISTNTSATNSPIPDFNFSLDPVEIDPNFPFNTPGFFS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00482 361 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 6 280 IPR044810 GO:0003700
Viun3g00482 361 ProSiteProfiles WRKY domain profile. 127 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun3g00482 361 FunFam WRKY transcription factor 53 118 195 - -
Viun3g00482 361 Gene3D WRKY domain 118 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun3g00482 361 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun3g00482 361 Pfam WRKY DNA -binding domain 133 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun3g00482 361 MobiDBLite consensus disorder prediction 193 212 - -
Viun3g00482 361 SUPERFAMILY WRKY DNA-binding domain 131 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00482 Viun-Chr3 2857639 2859442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00482 6 256 WRKY Transcription Factor Family AT4G23810 45.255 1.26e-67 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun3g00482 WRKY 8.3e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00482 - - gmx:100815760 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02663 2 32221503 32223221 Viun3g00482 3 2857639 2859442 PCT