Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00440 ATGGACGATACTGAAACAAAACAGCGAATCGAGGAAACAGTTCGCCGGATTTTGCAAGAGTCGAACATGGACGAGGTTACGGAGTCTAAGATTCGAAAGCAGGCCTCCGAGGAACTCGGTCTCAACCTGTCTCAGCCCCATTTCAAAGCCTTCGTGAAACAGGTCGTGGGGGCTTTTCTGCAAGAAATAGAAGAACAGCAGCAACAACAAGAAGAAAATGATGAGGAAGAAGGTGAAGAAGAACAAGGAGTTTCCCAGGGCAAGGAGTACGATGATGAAGGCAATCTCATCATCTGCAAGCTTTCAGATAAGAGAAGGGTGACCGTTCAGGATTTCAGAGGGAAAACATTGGTCTCCATTCGCGAGTACTATAAAAAAGATGGCAAGGAACTTCCTTCCTCCAAAGGAATAAGTTTGAGTGAGGAGCAGTGGTTTGCCTTTAAAAAAAATCTTCCTGCCATAGAAAAAGCTATTAAGAAAATGGAATCTCGTTGA 495 0.4424 MDDTETKQRIEETVRRILQESNMDEVTESKIRKQASEELGLNLSQPHFKAFVKQVVGAFLQEIEEQQQQQEENDEEEGEEEQGVSQGKEYDDEGNLIICKLSDKRRVTVQDFRGKTLVSIREYYKKDGKELPSSKGISLSEEQWFAFKKNLPAIEKAIKKMESR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00440 164 MobiDBLite consensus disorder prediction 67 82 - -
Viun3g00440 164 FunFam RNA polymerase II transcriptional coactivator KELP 88 164 - -
Viun3g00440 164 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 4 61 IPR014876 -
Viun3g00440 164 PIRSF RNA_polymII_KELP 1 164 IPR017415 -
Viun3g00440 164 MobiDBLite consensus disorder prediction 63 90 - -
Viun3g00440 164 Coils Coil 60 80 - -
Viun3g00440 164 SUPERFAMILY DEK C-terminal domain 3 58 - -
Viun3g00440 164 Pfam DEK C terminal domain 5 60 IPR014876 -
Viun3g00440 164 Gene3D - 2 62 - -
Viun3g00440 164 Gene3D Transcriptional Coactivator Pc4; Chain A 87 164 IPR009044 GO:0003677|GO:0006355
Viun3g00440 164 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 4 163 IPR045125 GO:0003713|GO:0060261
Viun3g00440 164 SUPERFAMILY ssDNA-binding transcriptional regulator domain 98 160 IPR009044 GO:0003677|GO:0006355
Viun3g00440 164 MobiDBLite consensus disorder prediction 1 28 - -
Viun3g00440 164 Pfam Transcriptional Coactivator p15 (PC4) 99 150 IPR003173 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00440 Viun-Chr3 2655601 2657999 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Viun3g00440 DEK_C 4.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00440 K25815 - gmx:100305633 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00440 3 2655601 2657999 Viun3g00440 3 2655601 2657999 ECH