Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun3g00435 | ATGGATGTGCCACAAACTCCAACCCCCTCTCCACATTTGTATCCACAAGAACTTCAACTTAAACTTTACCAAGCCTTCATCTTCTCCATTCCCATACTCTTTTCCATCATTCTTGTTCTCTTGTTTTACTTGTTCTACCTCAAAAGGAGAGCTTCCTCTCTCTCATCACCACCCCTTCACATACTTACCAACAGTTCCAATCCTCAAACAACATATCCTTACCCTTCACAACCTTGCCGATTAGATCTGACTGTGCAATTTCTTGACAAACTTCCAAGAGTTTTATTTGATGAGGATTTTGGAACAAGAGATTCTGTATGTTGTGTTTGCCTTGGAGAATTTGAGGTGAAGGAAGAGCTGCTACAAATTCCTTATTGCAAGCATGTGTTTCACATAAGCTGCATATGCAACTGGTTGCAATCAAACTCCACGTGTCCACTTTGTAGATGCTGCATCACACCCTCCACTAAGTTCCTTAATACACCCTCACCTATTGTATCAGACTCACCACAGCAGGGTGCAATTTCAGGCTCTTCATCACACATCATATCAATGCCTCAGCAACAAGAAGATGAAGTTGGTAATTCCACAAACACTACCATTTCCCAAGGAAATAATGGTGTATTACTTAGATGA | 636 | 0.4104 | MDVPQTPTPSPHLYPQELQLKLYQAFIFSIPILFSIILVLLFYLFYLKRRASSLSSPPLHILTNSSNPQTTYPYPSQPCRLDLTVQFLDKLPRVLFDEDFGTRDSVCCVCLGEFEVKEELLQIPYCKHVFHISCICNWLQSNSTCPLCRCCITPSTKFLNTPSPIVSDSPQQGAISGSSSHIISMPQQQEDEVGNSTNTTISQGNNGVLLR | 211 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun3g00435 | 211 | PANTHER | RING-H2 FINGER PROTEIN ATL16 | 8 | 193 | IPR044600 | GO:0016567|GO:0016740 | |
Viun3g00435 | 211 | MobiDBLite | consensus disorder prediction | 186 | 211 | - | - | |
Viun3g00435 | 211 | SUPERFAMILY | RING/U-box | 85 | 159 | - | - | |
Viun3g00435 | 211 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 77 | 155 | IPR013083 | - | |
Viun3g00435 | 211 | ProSiteProfiles | Zinc finger RING-type profile. | 107 | 149 | IPR001841 | - | |
Viun3g00435 | 211 | Pfam | Ring finger domain | 107 | 149 | IPR001841 | - | |
Viun3g00435 | 211 | SMART | ring_2 | 107 | 148 | IPR001841 | - | |
Viun3g00435 | 211 | CDD | RING-H2_EL5-like | 107 | 149 | - | - | |
Viun3g00435 | 211 | FunFam | Putative E3 ubiquitin-protein ligase RHA4A isoform A | 76 | 154 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun3g00435 | Viun-Chr3 | 2627123 | 2629463 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun3g00435 | 3 | 154 | C3H Transcription Factor Family | AT4G10150 | 38.608 | 8.51e-32 | 114 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun3g00435 | K19039 | - | pvu:PHAVU_002G300500g | 325.094 |