Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00413 ATGTTGGAAGGTGGTGCGAAATTCCCGGGAATAATAGATCTCAACAAAAATAATAACAACTACTATGATTTCTCTCAAGGCTTCTACCATAAGCTTGGGGAGGGTACCAATATGTCAATTGACAGCGTTGGGAGCTTACAGACAAGTAACGGTGGAGGATCTGTTGCGATGTCTATTGATAATAGCAGTGTTGGGTCCAATGATTCCCATACTCGCATGTTGGACCACCAAGGGTTGCGGAGGCGTGCCAATGACAACTACTCTGTTGCACATAGTGCCAATCGTCGGGGAAGAGTTACCCATGCATTGAGTGATGATGCTTTAGCTCAAGCTCTAATGGACAACAGTTCTCCTACTGAAGGGCTTGACAATTTTGATGAGTGGACAATTGATTTGAGGAAACTCAATATGGGTGAGCCTTTTGCACAAGGAGCCTTTGGAAAACTCTACAGAGGTACTTACAATGGTGAAGATGTTGCTATTAAAATATTGGAGAGGCCGGAGAATGATCCAGCAAAGGCTCAATTGATGGAACAGCAATTCCAGCAGGAGGTCATGATGTTGGCTACCCTAAAACATCCTAACATTGTTCGATTTATTGGCGCATGCCGTAAGCCAATGGTGTGGTGCATTGTGACTGAGTATGCTAAAGGTGGTTCAGTTCGACAATTTCTAATGAAGCGGCAAAAGCGATCAGTTCCCCTCAAATTAGCTGTGAAGCAAGCTTTGGATGTTGCAAGGGGGATGGCTTATGTTCATGGCCTTGGGTTGATCCACAGGGACTTGAAATCTGATAATCTTTTGATTTTTGGTGACAAGTCAATTAAAATTGCTGACTTTGGAGTTGCCCGAATTGAGGTTCAAACTGAAGGGATGACACCTGAGACTGGAACATACCGTTGGATGGCTCCGTGGTGA 918 0.4434 MLEGGAKFPGIIDLNKNNNNYYDFSQGFYHKLGEGTNMSIDSVGSLQTSNGGGSVAMSIDNSSVGSNDSHTRMLDHQGLRRRANDNYSVAHSANRRGRVTHALSDDALAQALMDNSSPTEGLDNFDEWTIDLRKLNMGEPFAQGAFGKLYRGTYNGEDVAIKILERPENDPAKAQLMEQQFQQEVMMLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLMKRQKRSVPLKLAVKQALDVARGMAYVHGLGLIHRDLKSDNLLIFGDKSIKIADFGVARIEVQTEGMTPETGTYRWMAPW 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00413 305 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 68 304 - -
Viun3g00413 305 SUPERFAMILY Protein kinase-like (PK-like) 123 304 IPR011009 -
Viun3g00413 305 Pfam Protein tyrosine and serine/threonine kinase 136 304 IPR001245 GO:0004672|GO:0006468
Viun3g00413 305 SMART serkin_6 135 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g00413 305 FunFam Serine/threonine-protein kinase isoform 1 125 217 - -
Viun3g00413 305 Gene3D Transferase(Phosphotransferase) domain 1 211 304 - -
Viun3g00413 305 Gene3D Phosphorylase Kinase; domain 1 126 210 - -
Viun3g00413 305 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Viun3g00413 305 ProSiteProfiles Protein kinase domain profile. 135 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00413 Viun-Chr3 2497422 2501486 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00413 17 304 MAP Kinase Kinase Kinase AT4G31170 75.862 3.90e-157 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Viun3g00413 PK_Tyr_Ser-Thr 4.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00413 - - gmx:100788536 609.372