Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00389 ATGGGGAAGATAAAGGCACTTAAGAGAAGTAAATGGGTATTGGGTTGGGTTAGGAAAAACACAATCATTCTCTTAAGCAGAGAATCGGTTCACACTCATTACTCTCACACTATTTTATCCCTCTCACTCGCTTCAAAACTCTTTACAACTCAAAAACCAAAACCTTCTCAAATCTTCTTCTTCTTCATCTTCTTCTTCATTCACCCTTCTCCAATGGCGGGTGTTATGAATAAGAAGGTCGACAAGATTCGGCAAATCGTGCGTCTCAAACACCTCATGTCGCGGTGGAAGCAAATGAGCCTCCGCCGCCGCTCCGAGGACCCTTCCTCCACGCGCCGCCCTCCCTCCGGGTTCACCTTCGTCTACGTCGGCCCCGAACGCACGCGCTTCGCTATCCCCGCGCGTTTCCTCAACCTCCCCGTCTTCGAGGGCCTCCTCAAACAAACCGAGGAACAGTTCGGACTCCGAGGTAACGGCGGTTTGGTCCTCCCTTGCCAAGTCCCCTTTTTCTCTAACGTCGTTAAATTTCTCCACAAGGACGAACACAAGTACGGAAAACTCTCTCTTCAAGACTTCCTCAACTTGGTCTCCGATGCTGACGTTTCCGATTCCTGTAAGGAAAACGTCGTCGTTTTCACCCCTCTGCTGCAGAAAGCAGAGGTTTGA 666 0.5 MGKIKALKRSKWVLGWVRKNTIILLSRESVHTHYSHTILSLSLASKLFTTQKPKPSQIFFFFIFFFIHPSPMAGVMNKKVDKIRQIVRLKHLMSRWKQMSLRRRSEDPSSTRRPPSGFTFVYVGPERTRFAIPARFLNLPVFEGLLKQTEEQFGLRGNGGLVLPCQVPFFSNVVKFLHKDEHKYGKLSLQDFLNLVSDADVSDSCKENVVVFTPLLQKAEV 221
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00389 221 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 102 172 IPR003676 GO:0009733
Viun3g00389 221 Pfam Auxin responsive protein 95 177 IPR003676 GO:0009733
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Viun3g00389 Viun-Chr3 2325923 2326913 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00389 79 191 Calmodulin-binding Proteins AT3G43120 28.188 3.98e-16 71.2