Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00380 ATGAGGTTAACGTCACCTGCGATTCTCAACCTTCTCTTTCTATGTGATCTCCTTCTTTGGCTTCTTCCCACATTCTCTTTCTCTCTCCTCGCCGCTGACGCCAAGCCGGAGCCAGAGTTTCTCCTCGCCGGAAAAAACGCAACCTCCATCGTCAATGCCTCGCTTGGGAGATCCGGCGATCATAGCTTCGCGAACATGATTGATCGGGCTCTCGAAAGAGAGTTCCCCGAGAATGAGCAGAATGAAGGTACCGATCCTGGCGGTTTCAACAACAGTGTTGCTGAACAGCAGGCTGTCTTGGAAACTGTTGCCAGAGTTGTCCCCAAGAAAAATGAAAGCAAAGAAGAAAAGTCATTTCAGTTCCACAATGTTTTCAACTTGGAAAATGAGAACAGAGCAGACGATATGCCAACTTTAATTGATCGGAAGGACAACGTCTTTATCATATCCAATCCCAAGTCAAAATATCCAGTTCTCCAATTAGACTTGAGATTGATATCAGATCTCGTGGTTGTCATTGTGTCTGCAACCTGTGGCGGCATTGCCTTTGCTTCTGCTGGACAACCAGTGATAACTGGATATCTGCTAGCAGGATCAATCATCGGACCAGGAGGTTTGAGTTTTGTTAGTGAAATGGTCCAAGTTGAGACAGTTGCTCAATTTGGTGTCATCTTTTTGCTCTTTGCATTGGGCTTAGAGTTTTCAGCAACGAAGCTTCGAGTTGTTCGAGCAGTGGCTATCCTTGGAGGGCTACTCCAAATTTTCTTATTTATGTGCTTGTGTGGAATAACAGCTTCATTATGTGGTGGTAAATCATCTGAAGGAATATTTGTAGGTGCATTTCTATCCATGTCTTCAACAGCTGTGGTCTTGAAATTCTTAATGGAAAGGAATAGCGTCAATGCCCTTCATGGTCATGTTACAATTGGAACTCTGATACTGCAGGATTGTGCCGTTGGTTTGCTCTTTGCACTGCTTCCTGTTTTGGGTGGAACATCCGGTGTTCTTCAAGGAGTAGTATCCATGGCTAAGTCATTGGTGACCTTAATTGCATTTTTGGCCATTTTGACAATATTATCTCGTACTTGTGTGCCCTGGTTCCTTAAGCTAATGATAAGTTTATCCTCTCAGACGAATGAACTTTATCAATTGGCATCAGTGGCTTTCTGCCTACTTGTTGCTTGGTGTAGTGATAAGCTGGGTTTAAGTCTTGAACTAGGTTCCTTTGCTGCCGGAGTGATGATATCAACAACAGATCTTGGTCAACATACACTTGAACAAGTTGAGCCAATTCGCAATTTTTTTGCTGCTCTGTTCTTGGCCAGCATTGGGATGCTTATACATGTCCATTTCCTTTGGAATCATGTTGACATTTTACTGGCATCTGTTATATTGGTGATCATTATAAAAACAATTGTAGCTGCATCTGTTGTTAAGGGGTTTGGATACAACAACAAGACTTCACTTCTTGTTATTCCACATGTGTAG 1488 0.4294 MRLTSPAILNLLFLCDLLLWLLPTFSFSLLAADAKPEPEFLLAGKNATSIVNASLGRSGDHSFANMIDRALEREFPENEQNEGTDPGGFNNSVAEQQAVLETVARVVPKKNESKEEKSFQFHNVFNLENENRADDMPTLIDRKDNVFIISNPKSKYPVLQLDLRLISDLVVVIVSATCGGIAFASAGQPVITGYLLAGSIIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSATKLRVVRAVAILGGLLQIFLFMCLCGITASLCGGKSSEGIFVGAFLSMSSTAVVLKFLMERNSVNALHGHVTIGTLILQDCAVGLLFALLPVLGGTSGVLQGVVSMAKSLVTLIAFLAILTILSRTCVPWFLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLGQHTLEQVEPIRNFFAALFLASIGMLIHVHFLWNHVDILLASVILVIIIKTIVAASVVKGFGYNNKTSLLVIPHV 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00380 495 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 48 491 IPR045158 GO:0015386|GO:0071805|GO:1902600
Viun3g00380 495 Gene3D - 163 492 IPR038770 -
Viun3g00380 495 Pfam Sodium/hydrogen exchanger family 170 491 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00380 Viun-Chr3 2266184 2272674 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00380 8 491 Antiporters AT2G19600 79.098 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00380 K26735 - gmx:100788884 845.884