Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00379 ATGAGGTTAACGTCACCTGCGATTCTCAACCTTCTCTTTCTATGTGATCTCCTTCTTTGGCTTCTTCCCACATTCTCTTTCTCTCTCCTCGCCGCTGACGCCAAGCCGGAGCCAGAGTTTCTCCTCGCCGGAAAAAACGCAACCTCCATCGTCAATGCCTCGCTTGGGAGATCCGGCGATCATAGCTTCGCGAACATGATTGATCGGGCTCTCGAAAGAGAGTTCCCCGAGAATGAGCAGAATGAAGGTACCGATCCTGGCGGTTTCAACAACAGTGTTGCTGAACAGCAGGCTGTCTTGGAAACTGTTGCCAGAGTTGTCCCCAAGAAAAATGAAAGCAAAGAAGAAAAGTCATTTCAGTTCCACAATGTTTTCAACTTGGAAAATGAGAACAGAGCAGACGATATGCCAACTTTAATTGATCGGAAGGACAACGTCTTTATCATATCCAATCCCAAGTCAAAATATCCAGTTCTCCAATTAGACTTGAGATTGATATCAGATCTCGTGGTTGTCATTGTGTCTGCAACCTGTGGCGGCATTGCCTTTGCTTCTGCTGGACAACCAGTGATAACTGGATATCTGCTAGCAGGATCAATCATCGGACCAGGAGGTTTGAGTTTTGTTAGTGAAATGGTCCAAGTTGAGACAGTTGCTCAATTTGGTGTCATCTTTTTGCTCTTTGCATTGGGCTTAGAGTTTTCAGCAACGAAGCTTCGAGTTGTTCGAGCAGTGGCTATCCTTGGAGGGCTACTCCAAATTTTCTTATTTATGTGCTTGTGTGGAATAACAGCTTCATTATGTGGTGGTAAATCATCTGAAGGAATATTTGTAGGTGCATTTCTATCCATGTCTTCAACAGCTGTGGTCTTGAAATTCTTAATGGAAAGGAATAGCGTCAATGCCCTTCATGGTCATGTTACAATTGGAACTCTGATACTGCAGGATTGTGCCGTTGGTTTGCTCTTTGCACTGCTTCCTGTTTTGGGTGGAACATCCGGTGTTCTTCAAGGAGTAGTATCCATGGCTAAGTCATTGGTGACCTTAATTGCATTTTTGGCCATTTTGACAATATTATCTCGTACTTGTGTGCCCTGGTTCCTTAAGCTAATGATAAGTTTATCCTCTCAGACGAATGAACTTTATCAATTGGCATCAGTGGCTTTCTGCCTACTTGTTGCTTGGTGTAGTGATAAGCTGGGTTTAAGTCTTGAACTAGGTTCCTTTGCTGCCGGAGTGATGATATCAACAACAGATCTTGGTCAACATACACTTGAACAAGTTGAGCCAATTCGCAATTTTTTTGCTGCTCTGTTCTTGGCCAGCATTGGGATGCTTATACATGTCCATTTCCTTTGGAATCATGTTGACATTTTACTGGCATCTGTTATATTGGTGATCATTATAAAAACAATTGTAGCTGCATCTGTTGTTAAGGGGTTTGGATACAACAACAAGACTTCACTTCTTGTTGGGATGTCCCTGGCACAAATTGGGGAATTTTCCTTTGTTCTTCTCAGCCGTGCTTCAAATCTTCATTTAGTTGAGGGAAAGTTGTATCTATTGCTCCTGGGAACAACAGCTCTTAGTTTGGTGACTACACCTTTACTCTTCAAGTTAATTCCTGCAGTTGTGCATCTTGGTGCATTGTTGCGGTGGTTCCCTCCTGATAGTTCAACTGAGATTGCATTTAAAGGGGACAGCTTTCGTGTGGACAGTGCTAAGCGTATTACTTTGATGGTTCAAGGCTCTCATGATTCATAA 1764 0.4303 MRLTSPAILNLLFLCDLLLWLLPTFSFSLLAADAKPEPEFLLAGKNATSIVNASLGRSGDHSFANMIDRALEREFPENEQNEGTDPGGFNNSVAEQQAVLETVARVVPKKNESKEEKSFQFHNVFNLENENRADDMPTLIDRKDNVFIISNPKSKYPVLQLDLRLISDLVVVIVSATCGGIAFASAGQPVITGYLLAGSIIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSATKLRVVRAVAILGGLLQIFLFMCLCGITASLCGGKSSEGIFVGAFLSMSSTAVVLKFLMERNSVNALHGHVTIGTLILQDCAVGLLFALLPVLGGTSGVLQGVVSMAKSLVTLIAFLAILTILSRTCVPWFLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLGQHTLEQVEPIRNFFAALFLASIGMLIHVHFLWNHVDILLASVILVIIIKTIVAASVVKGFGYNNKTSLLVGMSLAQIGEFSFVLLSRASNLHLVEGKLYLLLLGTTALSLVTTPLLFKLIPAVVHLGALLRWFPPDSSTEIAFKGDSFRVDSAKRITLMVQGSHDS 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00379 587 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 48 578 IPR045158 GO:0015386|GO:0071805|GO:1902600
Viun3g00379 587 Pfam Sodium/hydrogen exchanger family 170 539 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Viun3g00379 587 Gene3D - 163 546 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00379 Viun-Chr3 2264439 2272669 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00379 8 587 Antiporters AT2G19600 80.000 0.0 892
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00379 K26735 - gmx:100788884 993.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00379 3 2264439 2272669 Viun3g00379 3 2264439 2272669 ECH