Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00367 ATGGAGAATATATCAGAGCCAAAAGTGTCCCCGAATACAGTGATATTGCAGAGTGAGGGATTACTAAAGTATATATTGGAGACCGGCGTTTATCCACGAGAAGCAGAAACCCTCAAAGAGCTAAGAAATGCAACTGCAAAGCACCCCATGGGTTTCATGGGTGCTGCACCTGATGCGGGTCAGCTAATGGCCATGCTCTTGAAGGTTTCGAATGCTAAAAACACAATTGAAGTTGGAGTTTTTACTGGATACTCTCTTCTCCTCACTGCACTCACCATTCCAGATGATGGAAAAATTATAGCGATGGATCGAGATAGAAAAGCTTATGAGATAGGACTACCATTCATTAAAAAGGCTGGTGTTGAACACAAGATTGACTTCATTGAGTCTCCAGCTTTACCAGTTCTTGATAAGCTCTTAGAAGATGCGGCAAAGGAGGGGAGTTTTGACTTTGCTTTCATTGATGCTGATAAAAAGAATTACTGGAATTACCACGAGAGACTTATGAGATTGGTGAAGATCGGTGGAATAGTTGCATATGATAATGCACTGTGGGGAGGAACTGTTGCCTTGCCTGAAAAGGCAGTTTCGGAGGATAAACAAGAGTGGAGACTCTTATCGCTTGCTTTCAACCAAGCAATTTCAAAGGATTCTCGTGTTGAAATTGCTTTTGTTTCAATTGGTGATGGAATCATTTTCTGCAGGCGCATAACTTGA 717 0.4184 MENISEPKVSPNTVILQSEGLLKYILETGVYPREAETLKELRNATAKHPMGFMGAAPDAGQLMAMLLKVSNAKNTIEVGVFTGYSLLLTALTIPDDGKIIAMDRDRKAYEIGLPFIKKAGVEHKIDFIESPALPVLDKLLEDAAKEGSFDFAFIDADKKNYWNYHERLMRLVKIGGIVAYDNALWGGTVALPEKAVSEDKQEWRLLSLAFNQAISKDSRVEIAFVSIGDGIIFCRRIT 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00367 238 Gene3D Vaccinia Virus protein VP39 6 238 IPR029063 -
Viun3g00367 238 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 14 237 IPR002935 GO:0008171
Viun3g00367 238 PANTHER O-METHYLTRANSFERASE-RELATED 11 237 - -
Viun3g00367 238 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 236 IPR029063 -
Viun3g00367 238 Pfam O-methyltransferase 30 237 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00367 Viun-Chr3 2171610 2173827 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00367 15 237 Monolignol Biosynthesis Gene Families AT4G26220 64.126 7.37e-107 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00367 K00588 - gmx:100795229 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00367 3 2171610 2173827 Viun3g00367 3 2171610 2173827 ECH