Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00341 ATGAAGATCGAGGAATTGGACGACGCGGAGTGTAGTATAGACGAACAAGAGAAGTACGAGAGGCAGATTGTCAGCGTTGAAGTGAAGAGAGCGATTGTGGGCGCAGGTGCTCGGATCCTGTTCTATCCCACACTCTTGTATAATGTGCTTCGTAACAAAATTGAAAGTGAGTTCAGGTGGTGGGATCGAATTGATGAGTTTTTGTTACTGGGCGCTGTTCCGTTCCCCAAGGACGTTCCTCTTTTGAAGAACCTTGGTGTGGGTGGTGTGATTACTCTCAATGAGCCATATGAAACCTTGGTGCCGTCGTCGCTGTATCGGGCTCACGGGATTGATCATTTGGTAATTCCCACTAGAGATTATCTCTTTGCCCCCTCGATTGTTGATATCAACCAGGCTGTGCAGTTCATTCATCAGAATGCAACTTGCGGCAAAACTACTTATGTTCACTGTAAAGCTGGACGTGGGAGGAGTACAACAATTGTGCTCTGTTATCTGGTTGAATACAAGCACATGACACCTGCTGCTGCTCTGGAATATGTGCGGTCTCGACGACCTAGAGTCCTACTAGCACCATCACAGTGGAAGGCTGTTCAAAACTATAACAAGCGCAGGCCGTGTCCTTTACCCTACTCCCCCTCTGGGGACGCAGTACTTATAACCAAAGCGGATCTTGAAGGCTATCATAGCACATGTGATGCTGATATGGAGCTGGCTATTGTCCCCAAACTTCCAAGGACTATGCCCATGATTGCAAGATTATCTTGCCTGTTTGCATCATTGAAAGTATCTGGTAGCAGTGTACCAATGATCAGGCGGCTGCCGGTTTCTGAGTCACGTGCTTGCTAA 849 0.4759 MKIEELDDAECSIDEQEKYERQIVSVEVKRAIVGAGARILFYPTLLYNVLRNKIESEFRWWDRIDEFLLLGAVPFPKDVPLLKNLGVGGVITLNEPYETLVPSSLYRAHGIDHLVIPTRDYLFAPSIVDINQAVQFIHQNATCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAAALEYVRSRRPRVLLAPSQWKAVQNYNKRRPCPLPYSPSGDAVLITKADLEGYHSTCDADMELAIVPKLPRTMPMIARLSCLFASLKVSGSSVPMIRRLPVSESRAC 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00341 282 FunFam Dual specificity phosphatase domain protein 60 206 - -
Viun3g00341 282 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 54 203 IPR029021 -
Viun3g00341 282 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 128 196 IPR000387 GO:0016311|GO:0016791
Viun3g00341 282 SMART dsp_5 63 204 IPR020422 GO:0006470|GO:0008138
Viun3g00341 282 Pfam Dual specificity phosphatase, catalytic domain 83 203 IPR000340 GO:0008138|GO:0016311
Viun3g00341 282 CDD PTPMT1 60 204 IPR044596 GO:0004721
Viun3g00341 282 ProSiteProfiles Dual specificity protein phosphatase domain profile. 60 207 IPR020422 GO:0006470|GO:0008138
Viun3g00341 282 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 260 - -
Viun3g00341 282 ProSitePatterns Tyrosine specific protein phosphatases active site. 149 159 IPR016130 GO:0016311|GO:0016791
Viun3g00341 282 Gene3D Protein tyrosine phosphatase superfamily 60 205 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00341 Viun-Chr3 2026802 2029085 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00341 22 270 Protein tyrosine phosphatase (PTP) family AT2G35680 53.741 3.66e-101 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00341 - - gmx:100817410 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00341 3 2026802 2029085 Viun3g00341 3 2026802 2029085 ECH