Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00272 ATGTATAGATCATTTCTGAGATGTGATGATCCAAAAGGAGTTGTAGGATGTGGGACAATCAGGAAATACAGAACTCGTTCTCACAAAGTGAAGGACAAGACAAAAATGCAAGAGACAAGTGAAATAATGGAAACATCCTTGATCAACAAAAGATACAAAGAGGAGAAGAAGGTCGCCGAAGAATGTGATGGAAATCTAGTTGGTCCATCATCTTTGCAGCTCACACAGGTCTTCGGAAAGGATCATATGCTAGATTCATGGTCTAGAGATATTATATGTGAAGGAAAGTCCGAAGATATTGCAAAAGGTATTTTAAAAGGGACTATTGGTCTGCAAGATTCTCTAAGCATGCTTCGCAAGTTGCAAGAGGATGCCGCACAACATACACCTTCTTTTGGGAGAAAACAGACTGAGAAACCAGAAAGAGACAGAATTGATGGAAACAAGATTGGTAGAAGAGAGGCTAATCCATTAGGGGAACAAAGTAATACAAAGGGGTTTCAAAGACCACAGCTTTCTGCCGGTGGTTCTTCAAGTAACTGCAAAGAGGAACTTAAGAAGGTGATTAAGGAGAGTTTGGTTAGGCAAAATATGTTTCCAAAGACCTCTGAAGGATTTCATTCAGGTTCAGAAACTTTTCATATAAGCACAAGCCAATGTTCTGGGGTCAAGACTGACACCCTTTCTGATCCTTCTTTATCAGTAATAGCTTCAAAGATTGAAAGAGGACCTAGCCTAGTTTTCAAGCTGATGGGTTTAGAAGAAGGTCCCTCAAAATCATTTCCAGCTGCTAAGCAAAAACTGTTGGGTGGTGAGATAGATATGTCAAAGGTCAGAAACAATGATTCTACAGCTGAGAAGGTTAATCCAGAACTAAAACCCGTGAGGGAAACTCTTGACACAATGCATTTCAAAGGTATTTCTAAGGAGAATTTTGTCAAACATGTTCATCATCATTTCAATGACACCAGTTCCAAGCAGTTTGTTGATTTATCTCACATTTCACTTACGGAACCTCAATGTACAATATACCAGCAATCAGAAAAAAGAGCCTATGTTCCAGTTCTTCCAAAAGAGTTGACAAAACTGAGAAGAGAAATACTCTCTTCCAAAACTATCAAACATAGAAAAGGTTCCAGTTCCACCAACATGGGAAAAGAAATGGAAAAGGGTATGAGGAAACGGCTTAAGAAAGAGGAAGGACCTAATTTTCTCAAAGAGGATGCAAAAGGAAGCATTCCTGTTGAAGAATATGCGGGTAAGGTAAAACTATACTGTCACATTGGTCACACATCACATGTAAATGAGACAATTGATAGAAAATGGAAGGTACGGCCCATTAGTAGAAAACAGACAGAAAAGGATATCTCACAACCTACAATTGTGGCAGAACATCAGTACAAACGAGAAATCCCCTCCACAAAATTGAGCAAGCTGAAAAGTGGATCCAGAATCGACAAGAATGAGATTTCCTGCCTAAAGAGCAGAGGTTCAGACAACAAAAAAACTACGAATTCCAAGGATGTTAATGTTGACAATAAAAAGGTTAATTCCGTGATAGATTCCTTAACAGGTAGAAAGAATCAGATGAAAGAACAAAGCACTGTTGCAGAGCCAGAACCAGCTAAACTAACTGTTGAACAAATCAGGCAGAGAGAAAAGAAGAAAAATTACCCCGAGATTAGAATCTCCACTAGACTAGAAGATGAGCTCTCGATGGTGTGTGAAGCAGATGCCTTCACAAATAAGATTGGAGAAAAATGCAAGCTGAGGAAGAGTTCTTCGGGGGATGATCTCATTACGCTGCTCAAATCTGAACATAAAAATGATGGTATCAATGCTTATAGCATCGACGCTGACAGAGAAGGGACAGAGCTGAAACATTTTCTTCTAACGAGTCCATCATTCATAGGACACGCAAAGAAGCTCTTCAATCTTGATGTGGATCGTCCCAACACCCTAAAAAAAGATGAAACTGTTTGCAGCATGGCCAACATGAGGCTTTACTTGGATTGCGCTTACGAACTGACCGAACGTAAAAGTCTTGAAAACTCAAGATTACGCATCTCCTTATGCAGGTTGGTGGAAGAAATCTGTGATGGCATTGAGAATCTGAAATTTTACAGAGAAGATTATGATCGTGGAGAGGAAGATTTTTCGTACAATAATGACACATTTGCAATGATGGAAAAAGACATGAAGTGCAACGGAGAGATAAATGGAACGTGGGAAAGTGGTTGGAGAACAGGCTTTTGTGCAGATGAGGCTCAACTGGTTGTCAATAAAATAGAGAACCTGATTATAACTGGATTAATTGAGGACCTTGTAATCAATTTATTAGCTTAA 2346 0.393 MYRSFLRCDDPKGVVGCGTIRKYRTRSHKVKDKTKMQETSEIMETSLINKRYKEEKKVAEECDGNLVGPSSLQLTQVFGKDHMLDSWSRDIICEGKSEDIAKGILKGTIGLQDSLSMLRKLQEDAAQHTPSFGRKQTEKPERDRIDGNKIGRREANPLGEQSNTKGFQRPQLSAGGSSSNCKEELKKVIKESLVRQNMFPKTSEGFHSGSETFHISTSQCSGVKTDTLSDPSLSVIASKIERGPSLVFKLMGLEEGPSKSFPAAKQKLLGGEIDMSKVRNNDSTAEKVNPELKPVRETLDTMHFKGISKENFVKHVHHHFNDTSSKQFVDLSHISLTEPQCTIYQQSEKRAYVPVLPKELTKLRREILSSKTIKHRKGSSSTNMGKEMEKGMRKRLKKEEGPNFLKEDAKGSIPVEEYAGKVKLYCHIGHTSHVNETIDRKWKVRPISRKQTEKDISQPTIVAEHQYKREIPSTKLSKLKSGSRIDKNEISCLKSRGSDNKKTTNSKDVNVDNKKVNSVIDSLTGRKNQMKEQSTVAEPEPAKLTVEQIRQREKKKNYPEIRISTRLEDELSMVCEADAFTNKIGEKCKLRKSSSGDDLITLLKSEHKNDGINAYSIDADREGTELKHFLLTSPSFIGHAKKLFNLDVDRPNTLKKDETVCSMANMRLYLDCAYELTERKSLENSRLRISLCRLVEEICDGIENLKFYREDYDRGEEDFSYNNDTFAMMEKDMKCNGEINGTWESGWRTGFCADEAQLVVNKIENLIITGLIEDLVINLLA 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00272 781 MobiDBLite consensus disorder prediction 134 153 - -
Viun3g00272 781 PANTHER OS01G0228800 PROTEIN-RELATED 1 779 - -
Viun3g00272 781 MobiDBLite consensus disorder prediction 380 396 - -
Viun3g00272 781 MobiDBLite consensus disorder prediction 157 180 - -
Viun3g00272 781 MobiDBLite consensus disorder prediction 123 181 - -
Viun3g00272 781 MobiDBLite consensus disorder prediction 373 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00272 Viun-Chr3 1591365 1595367 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00272 626 776 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 31.902 3.81e-18 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00272 - - var:108346558 1354.35