Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00268 ATGGAAAACCAAACCGGTCTCAAGCTCAGAATCTCTCGCATGTTCAGATCCTCCTTCGGTTCCTGTCGAACAAAACACATAGCCGATGTCATGGAAAAAGCAGTTTTTGCACCACCCACCTCCACTGACCCACCCTCTCCCAAAGCCACACCCTTTCCTCCCTCTTGTACCTCCAAAACAATCAACGATACTTGCATACTCTCCTTCGACGATTCTCATTCTCTCTCTAGACGCAAAATCTCACATTTTTCACCACCTTTTCTCTGGGCCAACACCACCGCTACCACCACCAACAACCTCAAGCTTAACCTTGGTGTCATGTCGTGTCCACCCACTTCTCCCAGGGTTTCCCGCAACACAATCCAAGAACGCGATTTCATTTTCCACGACAAAACAAAGGCTTCGTCTTCAACAAAAAACGTTAAGACCAAGAAGAAGAAGAAGAAGAGACGTGCCCAGAAGAGAAGGGACTTTTTCCCTTTCAATTCATGCTCCAAAGACACCAGCTTTGGTGGCTACTGGTGGTACAGCAGCGACGAAGACGATGAAACTGACACCCTTTTCTCCTCCAAGAGCCTCTCCTCCGACTCCTCCAGGTCCCGGCGCCGTGGCCGGAAAAGTGACCGGAGCTCCGACATGGGTGTTCTGCCGCTGCACGGGAAGGTGAAGGACACGTTCGCGGTGGTGAAGCGCTCGAGCGACCCTTACAGTGATTTCAGGACTTCGATGGTGGAGATGATCGTGGAGAAGCAGATATTTTCGCCGGCGGATTTGGAGAATCTCTTGCAGTGTTTTCTGTCTCTGAATTCGTGTCATCATCATAAGATCATTGTCCAAGTGTTCACGGAGATTTGGGAGGCTTTGTTCTCTGACTGGTTTTGA 882 0.4989 MENQTGLKLRISRMFRSSFGSCRTKHIADVMEKAVFAPPTSTDPPSPKATPFPPSCTSKTINDTCILSFDDSHSLSRRKISHFSPPFLWANTTATTTNNLKLNLGVMSCPPTSPRVSRNTIQERDFIFHDKTKASSSTKNVKTKKKKKKRRAQKRRDFFPFNSCSKDTSFGGYWWYSSDEDDETDTLFSSKSLSSDSSRSRRRGRKSDRSSDMGVLPLHGKVKDTFAVVKRSSDPYSDFRTSMVEMIVEKQIFSPADLENLLQCFLSLNSCHHHKIIVQVFTEIWEALFSDWF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00268 293 NCBIfam uncharacterized plant-specific domain TIGR01568 226 289 IPR006458 -
Viun3g00268 293 MobiDBLite consensus disorder prediction 196 212 - -
Viun3g00268 293 MobiDBLite consensus disorder prediction 138 153 - -
Viun3g00268 293 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 124 290 IPR038933 GO:0045892
Viun3g00268 293 MobiDBLite consensus disorder prediction 188 216 - -
Viun3g00268 293 ProSiteProfiles OVATE domain profile. 228 287 IPR006458 -
Viun3g00268 293 MobiDBLite consensus disorder prediction 127 153 - -
Viun3g00268 293 Pfam Transcriptional repressor, ovate 232 289 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00268 Viun-Chr3 1538989 1540140 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Viun3g00268 Ovate 1.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00268 - - gmx:100776613 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00268 3 1538989 1540140 Viun3g00268 3 1538989 1540140 ECH