Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00228 ATGTCTGCTTCGATCCCTCTCCTCCTCCTTTTGACCTTCTTAATATCATCCATTGTCTCCTTCATCTTCCTGCGTCGAAACCACACCAAAGATGACCGGAGAAACCCGCCGGGACCACCACCCTTCCCGGTCATCGGTAACCTCCACATGCTGGGGAAGCTCCCGCACCGCACGCTCCAGGCCCTGGCCCAACAATACGGGCCCATCATGTCCCTGCGCCTGGGTCAGGTCCCAACCGTCGTCGTCTCCTCCTCCGAGGCCGCCCAACACTTCTTCAAATCACACGACGTCGTTTTCGCTAGCCGTCCAATACTCGAAGCGTCCAAGTACTTCGGCTACGGCTCCAAGGGACTAGTGTTCTCGGAGTACGGCGCGTACTGGCGGCACATGAGGAAAGTGTGCACGCTCCAACTTCTGAGCGCGTCGAAGGTGGAGTCCTTCGCGCCGCTGAGGAAGCGGGAGCTGGAGCTGGCAGTGAAGTCGGTGGAGGCGCGCGCCGCAAGAGGGGAGGTCTTGGACCTTAGCATGGTGGTGCACGACGTTGTGGAGGATATCGTGTACAAAATGGTGCTCGGGTGTAGCAAGCACGATGAGTTTGATTTGAAGGGGTTGATTCAGACCAGGATGAACATCACCGGTGCGTTTAATTTAGCGGATTATGTGCCTTGGCTTGGTTCTTTGGATCTTCAGGGATTGAATCGAAGTTTCAAGAAAATTAGTACAGCGCTTGACCAAGTGTTGGAAAAGATAATAAAGGAGCATGAACAGGGTTCAAATGCTCAAAATGAACAGCACCATAAGGACTTCATAGACATATTACTCTCTCTGATGTACCAACCCATCGATCCTCATGATGAACAAAGCCATGTCATTGATCAAACTAACATCAAGGCTATACTGTTTGATATGATTGCTGGGGCATTTGAAACTTCTGCAACTGTGGTGGAGTGGACGCTATCTGAACTCCTGAGGCATCCAAGAGTGATGAAAAAGCTTCAAGATGAGCTAGATAATGTGGTTGGAAGGAACAAATTAGTGGAGGAAAATGATTTGGTGAAGTTAAATTACTTGGATATTGTGATCAAGGAGACATTGAGATTATATCCTCCTGGACCATTAGTTCCTCGAGAGTCAACAGAGGATGCCACTGTTCAGGGTTACTTCTTAAAGAAAAAATCAAGAATCATAATAAACTTATGGGCCATGGGAAGAGATTCTGAGGTATGGTCTGATAATGCTGAAGTATTTTATCCAGAGAGATTCATCGATAACAATTTAGACTTCAGAGGATATGACTTTAAATATACGCCATTTGGTTTTGGTCGAAGGGGATGCCCAGGAATAAACCTAGGCTTAGCAACAGTTAAACTTGTAGTGGCTCAATTAGTACATTGTTTTAGTTGGGAACTTCCAGGAGGTATGGCCCCAGATGAGTTGGATATGAATGAGAAATTTGGCCTCACGATACCCAGAGTGAAGCACTTGTTTGCTGTACCCAGGAATCGTTTTCTCAGGGAATCTTGTAATGAATACAATTGA 1539 0.4737 MSASIPLLLLLTFLISSIVSFIFLRRNHTKDDRRNPPGPPPFPVIGNLHMLGKLPHRTLQALAQQYGPIMSLRLGQVPTVVVSSSEAAQHFFKSHDVVFASRPILEASKYFGYGSKGLVFSEYGAYWRHMRKVCTLQLLSASKVESFAPLRKRELELAVKSVEARAARGEVLDLSMVVHDVVEDIVYKMVLGCSKHDEFDLKGLIQTRMNITGAFNLADYVPWLGSLDLQGLNRSFKKISTALDQVLEKIIKEHEQGSNAQNEQHHKDFIDILLSLMYQPIDPHDEQSHVIDQTNIKAILFDMIAGAFETSATVVEWTLSELLRHPRVMKKLQDELDNVVGRNKLVEENDLVKLNYLDIVIKETLRLYPPGPLVPRESTEDATVQGYFLKKKSRIIINLWAMGRDSEVWSDNAEVFYPERFIDNNLDFRGYDFKYTPFGFGRRGCPGINLGLATVKLVVAQLVHCFSWELPGGMAPDELDMNEKFGLTIPRVKHLFAVPRNRFLRESCNEYN 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00228 512 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00228 512 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00228 512 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00228 512 CDD CYP71-like 65 495 - -
Viun3g00228 512 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00228 512 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00228 512 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00228 512 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00228 512 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00228 512 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00228 512 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00228 512 Pfam Cytochrome P450 36 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00228 512 Gene3D Cytochrome P450 21 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g00228 512 Coils Coil 329 349 - -
Viun3g00228 512 PANTHER CYTOCHROME P450 93A3-LIKE 12 502 - -
Viun3g00228 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Viun3g00228 512 FunFam Cytochrome P450 83B1 22 498 - -
Viun3g00228 512 SUPERFAMILY Cytochrome P450 32 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00228 Viun-Chr3 1312272 1314696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00228 9 503 Cytochrome P450 AT5G07990 39.216 1.01e-123 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00228 - - gmx:100814172 779.245