Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00219 ATGATGAAATCAAATAATATAGATAATGCTCCCACTCAGTCGCTTCTGAGTGTTGTGAACGGTATTCTTGAAGAAAGTGTTGAAAGAAGAAATGGGGAAATACCTCATCGTGTGGCTTGCTTATTGAGGAAGGTTGCGCAAGAGATTGAACGGCGCATGTCAACTCAAGCAGAACATTTACGAACTCAAAACAATCTTTTCAAGGCTCGAGAAGAAAAATACCAGTCGAGAATAAGAGTACTCGAGTCACTTGCATCCGAAACTAAAGATGGGAATGAGGGTGAGAGGATCAGAGTGGAAGAAAAAAAGGTTGATGAGAGAGAAGTTGGTAGGTTGATAAAAGAACAGCAGGACAAAATATTGGAAATTTCAGCTTTGAAGATAGAACTGGAAACGGCCAAAAGAACATATATAATACAATTCGCACGGTTGGAAGCAGAAGCTGAGGGTGCTAAAGCAGAACTGACACAAATGGTTCAAGAATATAAACAACAAATAGAAGAAGTAAGAAATAAGGCTGAAAATATAAAAGATGAATTAGTTGGGTTGATGAAAGAACAGGAGGACAAAAAAATGGAAATTATTTCAGCTCTGAAGAGCGATCTGGAGACAGCCAAAAGAACATATGAAACACAATTCTTTCAACTTGAAGAAGAAGCAAAAGGTGCTAAGGCATGGACACAAAAGGCCCAAGAATATGATTACCAATTGAAAGAATTACAAAATAAGGTTGAGAAGTTTCAAGAAGAGGTTAAGACAGCAAATGATGAGGAAATTGCTAGGTTGATGAAAGAACAGGAGCACAAAAATTCAGAAATTTCAGCTTTGAAGCAAGAGCTAGAAGCAACTAAAACAGCATATGAAGTACAGCGCTCCCAGATGGAAAAGGATGCCAAAGCAGAATTGGAACAAAAGTGCGAAGAATATGAGAATCAATTGAAAGAGTTAAGAAATAAGGTCAAGGAGCTAAAGGTTTCTTCTGATTCAAAAGATCAGAAGTGGAACATGAAAATGAACCGATTTCTGACTGTCATAACATTTCAATTCAGTTCCCTACAGAAAATGAAGTTATCTTTGGAATCCACTAAGCAAAGTGTAATGAAAGAGCAAACGGTTTATGCAGGGGAGTTGGATCTATTAGGTGTAAAACTTAAACCACTTCTACAAGCAGCTGAGAACTACCATGTTGTTATTGCTGAAAATAGAAAACTGTTCAATGAGATTCAAGAACTAAAAGGAAATATCAGAGTATATTGTCGAATTCGACCATCTGCAATTGGAAAATTGGAAAAAGAGTCTATTGTTGAACACGCTGGTGAAAATGATTTGGTTGTGGCAAATCCAACCAAAGATGGAAAAGATGCTTTTCGATCATTTAAATTTAACAGGGTTTTCAGCCCTGCCGCAACTCAAGCGGACGTATACTCCGACATCCAAGACTTCACAAGATCAGTTCTAGATGGGTATAGTGTGTGTATATTTGCTTATGGTCAAACTGGTTCAGGGAAAACTTATACAATGACTGGTCCAAATGGGGCAACAAGCGAGACTATTGGTGTTAACTATCGAGCTCTAAATGACCTCTTCAGGATTTCCACAAGTAGACAAAATGTAGTGGAGTATGAGATTGGAGTTCAAATGGTTGAGATATATAACGAGCAAGTCCGTGACTTGTTAACAACATATGGTTCTCCAAAAAGACTTGGGATATTGACTCAATCTCGACCAAATGGCTTAGTAGTCCCAGATGCTAGCTTGTTCCAAGTGAAATTACCTTCAGATGTTATTAAGCTAATGGAAATTGGACTTAAAAATAGAGCCATTGCTGCAACTGCTATGAATGAACGAAGTAGCCGTTCTCACAGTGTTGTCTCAGTTCACGTTACCGGGAAGGACTTGAAGACTGGTTGCACTATGGCTGGTAATCTTCATTTGGTAGATTTGGCTGGAAGTGAAAGAGTAGATCGTTCTGAAGCAGTTGGGGATAGGCTCAAAGAAGCACAGCATATAAACAAATCACTAGCTGCTCTTGGAGATGTTATTTTTTCCCTTTCTCAAAAGAGCTCCCATGTACCATACAGAAACAGCAAGCTTACTCAACTTCTACAAACTTCTCTTGGTGGTCAAGCAAAGACGCTCATGTTCGTCCAAATCAATTCAGACGTAAGTTCATATTCCGAAACTGTGAGCACTTTGAAGTTTGCTGAGAGGGTTTCAGGAGTTGAATTAGGAGCTGCACGAAGTAGCAAAGAGGGCAAAGACTTAAAAGAAATGATGGAACAGGTGTCTTGTTTGAAGAGCACTATTTTGGCGAAAGATGAGGAGATTGAGAGGCTTCAAGCCCTCAAAGGTTTATCTGGTAGCAGAGTTAAGCGAAATCTGATTCCACGAAGTAGAAGTAGTATCCAGTTACAATCTGCTAACCCCCCACCAATTGATGATCCTGCACCACAAAGTGATTTTGTTGCAACAACTGCAGAAAACTCAGGATGTACAGATTCTGATTTTGATGGAAGATCAAGTGATTTTTCTGACAGTGGTTTTGCTGCAGGCACAGAAACTGATGGTTCTGAAAGTTCCAGTCTCGCTGAAGTCCCAAAACAACCATCAGAGAAGATACCTAAAGGACTTCGCAGAACTGTTCAAGCGATGAGGAAATTTGGCAGAAGTTCATCAAACACAACCCCCAGCGCCTCCCCAGTAAAGGAGCCAGTGAAGGAGCCAGTGAAGGAGTCAGCGAAGAAGTCATCATCAGGTGTGTATACGCATACTACGTTAACACTCTTCTTAAAATCTTATGCTCATTCAACTTTTCAACTTTCTTTCACAAATTTGATTTCAGGTATTAAAAAAAGCATGAGTATAAGCTCCCTCAAGCCTCCAAAACTGTGGAAGTAA 2898 0.3948 MMKSNNIDNAPTQSLLSVVNGILEESVERRNGEIPHRVACLLRKVAQEIERRMSTQAEHLRTQNNLFKAREEKYQSRIRVLESLASETKDGNEGERIRVEEKKVDEREVGRLIKEQQDKILEISALKIELETAKRTYIIQFARLEAEAEGAKAELTQMVQEYKQQIEEVRNKAENIKDELVGLMKEQEDKKMEIISALKSDLETAKRTYETQFFQLEEEAKGAKAWTQKAQEYDYQLKELQNKVEKFQEEVKTANDEEIARLMKEQEHKNSEISALKQELEATKTAYEVQRSQMEKDAKAELEQKCEEYENQLKELRNKVKELKVSSDSKDQKWNMKMNRFLTVITFQFSSLQKMKLSLESTKQSVMKEQTVYAGELDLLGVKLKPLLQAAENYHVVIAENRKLFNEIQELKGNIRVYCRIRPSAIGKLEKESIVEHAGENDLVVANPTKDGKDAFRSFKFNRVFSPAATQADVYSDIQDFTRSVLDGYSVCIFAYGQTGSGKTYTMTGPNGATSETIGVNYRALNDLFRISTSRQNVVEYEIGVQMVEIYNEQVRDLLTTYGSPKRLGILTQSRPNGLVVPDASLFQVKLPSDVIKLMEIGLKNRAIAATAMNERSSRSHSVVSVHVTGKDLKTGCTMAGNLHLVDLAGSERVDRSEAVGDRLKEAQHINKSLAALGDVIFSLSQKSSHVPYRNSKLTQLLQTSLGGQAKTLMFVQINSDVSSYSETVSTLKFAERVSGVELGAARSSKEGKDLKEMMEQVSCLKSTILAKDEEIERLQALKGLSGSRVKRNLIPRSRSSIQLQSANPPPIDDPAPQSDFVATTAENSGCTDSDFDGRSSDFSDSGFAAGTETDGSESSSLAEVPKQPSEKIPKGLRRTVQAMRKFGRSSSNTTPSASPVKEPVKEPVKESAKKSSSGVYTHTTLTLFLKSYAHSTFQLSFTNLISGIKKSMSISSLKPPKLWK 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00219 965 Pfam Kinesin motor domain 430 739 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun3g00219 965 Gene3D - 105 145 - -
Viun3g00219 965 Gene3D - 254 295 - -
Viun3g00219 965 Gene3D - 173 215 - -
Viun3g00219 965 MobiDBLite consensus disorder prediction 845 866 - -
Viun3g00219 965 MobiDBLite consensus disorder prediction 821 837 - -
Viun3g00219 965 PANTHER KINESIN-LIKE PROTEIN KLP-3 213 896 IPR027640 GO:0003777|GO:0007018
Viun3g00219 965 ProSiteProfiles Kinesin motor domain profile. 414 741 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun3g00219 965 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 356 743 - -
Viun3g00219 965 Coils Coil 259 333 - -
Viun3g00219 965 Coils Coil 199 219 - -
Viun3g00219 965 Coils Coil 223 257 - -
Viun3g00219 965 SMART kinesin_4 412 749 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun3g00219 965 Coils Coil 134 193 - -
Viun3g00219 965 PRINTS Kinesin heavy chain signature 642 660 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun3g00219 965 PRINTS Kinesin heavy chain signature 691 712 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun3g00219 965 PRINTS Kinesin heavy chain signature 611 628 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun3g00219 965 PRINTS Kinesin heavy chain signature 488 509 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun3g00219 965 MobiDBLite consensus disorder prediction 797 917 - -
Viun3g00219 965 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 414 778 IPR027417 -
Viun3g00219 965 MobiDBLite consensus disorder prediction 885 900 - -
Viun3g00219 965 Gene3D Kinesin motor domain 354 743 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00219 Viun-Chr3 1243992 1249326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00219 219 759 Calmodulin-binding Proteins AT5G65930 34.173 2.61e-69 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00219 K10406 - gmx:100819914 1065.83